RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 SLC16A13Q7RTY0 426 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 BCDIN3DQ7Z5W3 292 aaKnown RBP4.85□□□□□ -1.63
SMC4-217ENST00000485867 ZNF645Q8N7E2 425 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 LFNGQ8NES3 379 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 OR5D18Q8NGL1 313 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 DYNLRB2Q8TF09 96 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 C2CD4CQ8TF44 421 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 PP6455Q8WZ26 134 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 MCUR1Q96AQ8 359 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 C10orf35Q96D05 121 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 ADAT3Q96EY9 351 aaPredicted RBP4.85□□□□□ -1.63
SMC4-217ENST00000485867 RDH12Q96NR8 316 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 SIKE1Q9BRV8 207 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 FAM103A1Q9BTL3 118 aaKnown RBP4.85□□□□□ -1.63
SMC4-217ENST00000485867 MRPL20Q9BYC9 149 aaKnown RBP4.85□□□□□ -1.63
SMC4-217ENST00000485867 RHOFQ9HBH0 211 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 TMBIM4Q9HC24 238 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 FAM118AQ9NWS6 357 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 ABCD2Q9UBJ2 740 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 PEMTQ9UBM1 199 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 FBXL17Q9UF56 701 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 RNF150Q9ULK6 438 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 DHDHQ9UQ10 334 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 TMEM14AQ9Y6G1 99 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 FLG2Q5D862 2391 aaPredicted RBP4.85□□□□□ -1.63
SMC4-217ENST00000485867 A0A0G2JLM5 398 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 CCDC182A6NF36 153 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 FCN1O00602 326 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 NDUFAB1O14561 156 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 AIREO43918 545 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 EDF1O60869 148 aaKnown RBP4.84□□□□□ -1.63
SMC4-217ENST00000485867 IFNA4P05014 189 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 ATF1P18846 271 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 GZMHP20718 246 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 PRKACBP22694 351 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 MAGEA2P43356 314 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 KCNJ3P48549 501 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 DEFA5Q01523 94 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 PPP1R8Q12972 351 aaKnown RBP4.84□□□□□ -1.63
SMC4-217ENST00000485867 CT45A1Q5HYN5 189 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 ZNF343Q6P1L6 599 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 ZNF322Q6U7Q0 402 aaPredicted RBP4.84□□□□□ -1.63
SMC4-217ENST00000485867 UTS2BQ765I0 119 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 SAXO1Q8IYX7 474 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 POC5Q8NA72 575 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 CCDC54Q8NEL0 328 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 CT45A3Q8NHU0 189 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 CNIH3Q8TBE1 160 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 ARL11Q969Q4 196 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 SPSB1Q96BD6 273 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 OPALINQ96PE5 141 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 HOPXQ9BPY8 73 aaPredicted RBP4.84□□□□□ -1.63
SMC4-217ENST00000485867 MFFQ9GZY8 342 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 FBXL15Q9H469 300 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 GORASP2Q9H8Y8 452 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 NEK6Q9HC98 313 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 SPAG4Q9NPE6 437 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 SCRT2Q9NQ03 307 aa4.84□□□□□ -1.63
SMC4-217ENST00000485867 PEF1Q9UBV8 284 aaKnown RBP4.84□□□□□ -1.63
SMC4-217ENST00000485867 A0A087WWL8 130 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 LOC107986453A0A1B0GWG9 222 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 IGLL5B9A064 214 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 H3BN98 237 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 H3BUA1 57 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 UBE2CO00762 179 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 RRHO14718 337 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 RPP14O95059 124 aaKnown RBP4.83□□□□□ -1.64
SMC4-217ENST00000485867 CTRB1P17538 263 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 EDN2P20800 178 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 APOC4P55056 127 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
SMC4-217ENST00000485867 CXCR4P61073 352 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 RBMY1FQ15415 496 aaKnown RBP4.83□□□□□ -1.64
SMC4-217ENST00000485867 CTRB2Q6GPI1 263 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 OR10V1Q8NGI7 309 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 C11orf45Q8TAV5 145 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 DYDC1Q8WWB3 177 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 FYTTD1Q96QD9 318 aaKnown RBP4.83□□□□□ -1.64
SMC4-217ENST00000485867 NR1H4Q96RI1 486 aaPredicted RBP4.83□□□□□ -1.64
SMC4-217ENST00000485867 NIPSNAP1Q9BPW8 284 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 DPCDQ9BVM2 203 aaPredicted RBP4.83□□□□□ -1.64
SMC4-217ENST00000485867 ZNF355PQ9NSJ1 428 aa4.83□□□□□ -1.64
SMC4-217ENST00000485867 V9GYY5 206 aaPredicted RBP4.83□□□□□ -1.64
SMC4-217ENST00000485867 TMEM30CPA0ZSE6 113 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 C2orf70A6NJV1 201 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 C16orf90A8MZG2 172 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 M0R2N4 97 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 BMPR1BO00238 502 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 ORC5O43913 435 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 GMNNO75496 209 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 HMGN1P05114 100 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 DBTP11182 482 aaKnown RBP4.82□□□□□ -1.64
SMC4-217ENST00000485867 FOLR2P14207 255 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 KRTAP10-6P60371 365 aaPredicted RBP4.82□□□□□ -1.64
SMC4-217ENST00000485867 ACTR3P61158 418 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 IL13RA2Q14627 380 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 GINS1Q14691 196 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 PLGLAQ15195 96 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 TWIST1Q15672 202 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 MICAQ29983 383 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms