RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 TPRKBQ9Y3C4 175 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 TRBV5-7A0A0A0MS05 114 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 PTGES3LE9PB15 166 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 LINC01619G3V211 115 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 FCN1O00602 326 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 SC5DO75845 299 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 LGALS1P09382 135 aaKnown RBP10.72□□□□□ -0.69
VARS-226ENST00000483275 FUT3P21217 361 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 GPR176Q14439 515 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 OR10K2Q6IF99 312 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 LIN54Q6MZP7 749 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 TRAT1Q6PIZ9 186 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 ZNF833PQ6ZTB9 187 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 IL1F10Q8WWZ1 152 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 MRPS24Q96EL2 167 aaKnown RBP10.72□□□□□ -0.69
VARS-226ENST00000483275 CLCC1Q96S66 551 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 IFI27L2Q9H2X8 130 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 KCNIP1Q9NZI2 227 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 KIAA1456Q9P272 454 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 JPT1Q9UK76 154 aa10.72□□□□□ -0.69
VARS-226ENST00000483275 FOXA2Q9Y261 457 aaPredicted RBP10.72□□□□□ -0.69
VARS-226ENST00000483275 PDCD6O75340 191 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 EGR2P11161 476 aaPredicted RBP10.71□□□□□ -0.69
VARS-226ENST00000483275 WNT4P56705 351 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 CX3CL1P78423 397 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 DEFA5Q01523 94 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 INSL4Q14641 139 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 PLGLAQ15195 96 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 LAIR2Q6ISS4 152 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 ACSM6Q6P461 480 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 ADAMTSL5Q6ZMM2 481 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 NPBQ8NG41 125 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 OR2AK2Q8NG84 335 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 CNBD2Q96M20 576 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 DERL3Q96Q80 235 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 SULT4A1Q9BR01 284 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 RSRP1Q9BUV0 290 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 MND1Q9BWT6 205 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 RAB9BQ9NP90 201 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 TPSG1Q9NRR2 321 aa10.71□□□□□ -0.69
VARS-226ENST00000483275 LCE6AA0A183 80 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 GPX5O75715 221 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 NDUFA3O95167 84 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 CDK1P06493 297 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 TPPP2P59282 170 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 PITPNAQ00169 270 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 YIF1BQ5BJH7 314 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 STEAP3Q658P3 488 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 LYPD6Q86Y78 171 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 NANOGP1Q8N7R0 232 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 ZNF485Q8NCK3 441 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 CHCHD6Q9BRQ6 235 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 CST11Q9H112 138 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 Q9H521 79 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 ZMAT4Q9H898 229 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 RAB26Q9ULW5 256 aa10.7□□□□□ -0.7
VARS-226ENST00000483275 RRHO14718 337 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 CT45A6P0DMU7 189 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 CT45A5P0DMU8 189 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 CT45A7P0DMV0 189 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 IGHV4-30-4P0DP06 118 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 LINC00205P59089 165 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 HMGN3Q15651 99 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 UNQ5815/PRO19632Q6UWF5 114 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 C6orf201Q7Z4U5 140 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 DRAXINQ8NBI3 349 aaPredicted RBP10.69□□□□□ -0.7
VARS-226ENST00000483275 OR6Q1Q8NGQ2 317 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 SETD6Q8TBK2 473 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 GALMQ96C23 342 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 ABHD14BQ96IU4 210 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 NICN1Q9BSH3 213 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 FAAP24Q9BTP7 215 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 CCDC90BQ9GZT6 254 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 FKBP14Q9NWM8 211 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 BLOC1S6Q9UL45 172 aa10.69□□□□□ -0.7
VARS-226ENST00000483275 FAM90A7PA6NKC0 464 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 FAM90A23PA8MXZ1 464 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 H7C2Y5 167 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 RGS10O43665 173 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 YPEL1O60688 119 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 CA11O75493 328 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 OR8U9P0C7N5 309 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 CELP19835 753 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 CRIP2P52943 208 aaPredicted RBP10.68□□□□□ -0.7
VARS-226ENST00000483275 HTD2P86397 168 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 MED22Q15528 200 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 ACTBL2Q562R1 376 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 RNLSQ5VYX0 342 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 PPP1R27Q86WC6 154 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 LFNGQ8NES3 379 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 GRPEL2Q8TAA5 225 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 THRSPQ92748 146 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 YPEL2Q96QA6 119 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 CITED4Q96RK1 184 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 TM2D3Q9BRN9 247 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 HDHD3Q9BSH5 251 aaPredicted RBP10.68□□□□□ -0.7
VARS-226ENST00000483275 CHMP1AQ9HD42 196 aaPredicted RBP10.68□□□□□ -0.7
VARS-226ENST00000483275 OR1A1Q9P1Q5 309 aa10.68□□□□□ -0.7
VARS-226ENST00000483275 RRP15Q9Y3B9 282 aaKnown RBP10.68□□□□□ -0.7
VARS-226ENST00000483275 HYDINQ4G0P3 5121 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms