RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 PRRG4Q9BZD6 226 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 ZNF552Q9H707 407 aaPredicted RBP10.6□□□□□ -0.71
CCDC78-213ENST00000482878 CISD1Q9NZ45 108 aaKnown RBP10.6□□□□□ -0.71
CCDC78-213ENST00000482878 IGHV3-64DA0A0J9YX35 117 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 hCG_38984A0A1B0GV85 526 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 TRDCB7Z8K6 153 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 RBM11P57052 281 aaKnown RBP10.6□□□□□ -0.71
CCDC78-213ENST00000482878 ATP6V1FQ16864 119 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 KCNIP4Q6PIL6 250 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 TGIF2LYQ8IUE0 185 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 BTF3L4Q96K17 158 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 HSPB9Q9BQS6 159 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 TMEM222Q9H0R3 208 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 ARRDC1-AS1Q9H2J1 176 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 RBKSQ9H477 322 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 LOC102723996A0A087X1L8 192 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 PROB1E7EW31 1015 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 FUT6P51993 359 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 FAM122AQ96E09 287 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 FAM103A1Q9BTL3 118 aaKnown RBP10.6□□□□□ -0.71
CCDC78-213ENST00000482878 PLK3Q9H4B4 646 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 RPRMQ9NS64 109 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 SLC7A10Q9NS82 523 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 IL36GQ9NZH8 169 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 MED13Q9UHV7 2174 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 NUPR1O60356 82 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 COX6A1P12074 109 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 CDKN1BP46527 198 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 KLF3P57682 345 aaPredicted RBP10.59□□□□□ -0.71
CCDC78-213ENST00000482878 KRTAP27-1Q3LI81 207 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 TMEM211Q6ICI0 200 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 CLEC2AQ6UVW9 174 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 TBC1D26Q86UD7 250 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 MCEMP1Q8IX19 187 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 SH2D2AQ9NP31 389 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 AURKAIP1Q9NWT8 199 aaPredicted RBP10.59□□□□□ -0.71
CCDC78-213ENST00000482878 OR6C3Q9NZP0 311 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 CDS2O95674 445 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 SSR4P51571 173 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 KRTDAPP60985 99 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 ACTL10Q5JWF8 245 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 ODF3L1Q8IXM7 274 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 ZNF611Q8N823 705 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 ZPBPQ9BS86 351 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 PARD6GQ9BYG4 376 aaPredicted RBP10.59□□□□□ -0.71
CCDC78-213ENST00000482878 MANBALQ9NQG1 85 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 A0A1W2PR80 420 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 GCH1P30793 250 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 PDLIM4P50479 330 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 HNRNPA3P51991 378 aaKnown RBP10.59□□□□□ -0.71
CCDC78-213ENST00000482878 SELENOTP62341 195 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 TMEM267Q0VDI3 215 aaPredicted RBP10.59□□□□□ -0.71
CCDC78-213ENST00000482878 Q6ZN92 141 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 H1FOOQ8IZA3 346 aaPredicted RBP10.59□□□□□ -0.71
CCDC78-213ENST00000482878 GPR35Q9HC97 309 aa10.59□□□□□ -0.71
CCDC78-213ENST00000482878 PKDREJQ9NTG1 2253 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 A0A0G2JMM0 328 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 A0A1W2PPB8 328 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 A0A1W2PRS3 328 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 NKX6-3A6NJ46 265 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 KIR3DP1A8MWS1 328 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 ZNF732B4DXR9 585 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 ADAM20O43506 726 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 TMEM50AO95807 157 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 TPPP2P59282 170 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 TAS2R30P59541 319 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 RAC3P60763 192 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 RPS19BP1Q86WX3 136 aaKnown RBP10.58□□□□□ -0.72
CCDC78-213ENST00000482878 SELENOHQ8IZQ5 122 aaKnown RBP10.58□□□□□ -0.72
CCDC78-213ENST00000482878 STPG4Q8N801 248 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 SPIN2AQ99865 258 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 SPIN2BQ9BPZ2 258 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 SF3B5Q9BWJ5 86 aaKnown RBP10.58□□□□□ -0.72
CCDC78-213ENST00000482878 OR2H1Q9GZK4 316 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 TMEM106BQ9NUM4 274 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 KIAA2026Q5HYC2 2103 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 DOCK11Q5JSL3 2073 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 ZNF716A6NP11 495 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 ZNF737O75373 536 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 CBR3O75828 277 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 B3GALT5-AS1P59052 145 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 OR8B8Q15620 311 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 EXT1Q16394 746 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 CEACAM16Q2WEN9 425 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 ZNF818PQ6ZRF7 136 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 CPT1CQ8TCG5 803 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 NAT6Q93015 286 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 LHX4Q969G2 390 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 TMEM56Q96MV1 263 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 HS3ST6Q96QI5 342 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 FOXB1Q99853 325 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 C20orf144Q9BQM9 153 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 VSIRQ9H7M9 311 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 WDR54Q9H977 334 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 LYRM2Q9NU23 88 aaPredicted RBP10.58□□□□□ -0.72
CCDC78-213ENST00000482878 R4GN57 208 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 TMEM56-RWDD3S4R434 201 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 TECTAO75443 2155 aa10.58□□□□□ -0.72
CCDC78-213ENST00000482878 BOD1L1Q8NFC6 3051 aa10.57□□□□□ -0.72
CCDC78-213ENST00000482878 ASPMQ8IZT6 3477 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms