RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 LUMP51884 338 aaPredicted RBP12.43□□□□□ -0.42
CCM2-215ENST00000482714 TSPAN5P62079 268 aa12.43□□□□□ -0.42
CCM2-215ENST00000482714 PRB3Q04118 309 aaPredicted RBP12.43□□□□□ -0.42
CCM2-215ENST00000482714 ZNF846Q147U1 533 aa12.43□□□□□ -0.42
CCM2-215ENST00000482714 MSMO1Q15800 293 aa12.43□□□□□ -0.42
CCM2-215ENST00000482714 UTF1Q5T230 341 aa12.43□□□□□ -0.42
CCM2-215ENST00000482714 ZNF660Q6AZW8 331 aaPredicted RBP12.43□□□□□ -0.42
CCM2-215ENST00000482714 LPCAT3Q6P1A2 487 aa12.43□□□□□ -0.42
CCM2-215ENST00000482714 OR8H3Q8N146 312 aa12.43□□□□□ -0.42
CCM2-215ENST00000482714 TOMM5Q8N4H5 51 aa12.43□□□□□ -0.42
CCM2-215ENST00000482714 ZBTB34Q8NCN2 500 aa12.43□□□□□ -0.42
CCM2-215ENST00000482714 AJUBAQ96IF1 538 aa12.43□□□□□ -0.42
CCM2-215ENST00000482714 S1PR3Q99500 378 aa12.43□□□□□ -0.42
CCM2-215ENST00000482714 ZNF221Q9UK13 617 aa12.43□□□□□ -0.42
CCM2-215ENST00000482714 RBM7Q9Y580 266 aaKnown RBP12.43□□□□□ -0.42
CCM2-215ENST00000482714 A0A0A6YYJ9 748 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 A0A1W2PRD5 423 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 A0A1W2PRF3 423 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 A0A1W2PRM7 423 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 VGLL3A8MV65 326 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 LANCL1O43813 399 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 RAB3DO95716 219 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 IGHV3-7P01780 117 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 NFYAP23511 347 aaPredicted RBP12.42□□□□□ -0.42
CCM2-215ENST00000482714 FAUP35544 74 aaKnown RBP12.42□□□□□ -0.42
CCM2-215ENST00000482714 RIPPLY3P57055 190 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 ZNF816Q0VGE8 651 aaPredicted RBP12.42□□□□□ -0.42
CCM2-215ENST00000482714 LSAMPQ13449 338 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 TPTE2P1Q5T6R2 138 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 RUSC1-AS1Q66K80 236 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 FAM53AQ6NSI3 398 aaPredicted RBP12.42□□□□□ -0.42
CCM2-215ENST00000482714 RBMS3Q6XE24 437 aaKnown RBP12.42□□□□□ -0.42
CCM2-215ENST00000482714 IL17RELQ6ZVW7 336 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 LYG1Q8N1E2 194 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 TRIM63Q969Q1 353 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 RPEQ96AT9 228 aa12.42□□□□□ -0.42
CCM2-215ENST00000482714 A0A0U1RQK1 487 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 DISC1C4P0D8 188 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 SLC31A2O15432 143 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 PPYP01298 95 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 FCER2P06734 321 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 OR8U9P0C7N5 309 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 BRS3P32247 399 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 INPP1P49441 399 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 UCP3P55916 312 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 SSX2Q16385 188 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 BAK1Q16611 211 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 RNASE12Q5GAN4 147 aaKnown RBP12.41□□□□□ -0.42
CCM2-215ENST00000482714 TRIQKQ629K1 86 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 Q6YL49 198 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 LHFPL4Q7Z7J7 247 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 LDLRAD3Q86YD5 345 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 ODF3L1Q8IXM7 274 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 OR8U1Q8NH10 309 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 ZDHHC16Q969W1 377 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 AKR1E2Q96JD6 320 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 SDHCQ99643 169 aaPredicted RBP12.41□□□□□ -0.42
CCM2-215ENST00000482714 IFI27L2Q9H2X8 130 aa12.41□□□□□ -0.42
CCM2-215ENST00000482714 FN1P02751 2386 aaKnown RBP12.41□□□□□ -0.42
CCM2-215ENST00000482714 A0A1W2PPE3 182 aa12.4□□□□□ -0.42
CCM2-215ENST00000482714 ECI1P42126 302 aa12.4□□□□□ -0.42
CCM2-215ENST00000482714 GPR12P47775 334 aa12.4□□□□□ -0.42
CCM2-215ENST00000482714 KLF9Q13886 244 aaPredicted RBP12.4□□□□□ -0.42
CCM2-215ENST00000482714 DEFB112Q30KQ8 113 aa12.4□□□□□ -0.42
CCM2-215ENST00000482714 LDLRAD2Q5SZI1 272 aa12.4□□□□□ -0.42
CCM2-215ENST00000482714 ZNF833PQ6ZTB9 187 aa12.4□□□□□ -0.42
CCM2-215ENST00000482714 BCL6BQ8N143 479 aaPredicted RBP12.4□□□□□ -0.42
CCM2-215ENST00000482714 TMEM86BQ8N661 226 aa12.4□□□□□ -0.42
CCM2-215ENST00000482714 TERB2Q8NHR7 220 aa12.4□□□□□ -0.42
CCM2-215ENST00000482714 ZNF418Q8TF45 676 aaPredicted RBP12.4□□□□□ -0.42
CCM2-215ENST00000482714 MOB3AQ96BX8 217 aa12.4□□□□□ -0.42
CCM2-215ENST00000482714 JMJD8Q96S16 334 aa12.4□□□□□ -0.42
CCM2-215ENST00000482714 PRRT1Q99946 306 aa12.4□□□□□ -0.42
CCM2-215ENST00000482714 ZNF2Q9BSG1 426 aaPredicted RBP12.4□□□□□ -0.42
CCM2-215ENST00000482714 NAP1L6A6NFF2 107 aa12.4□□□□□ -0.43
CCM2-215ENST00000482714 ST8SIA5O15466 376 aa12.4□□□□□ -0.43
CCM2-215ENST00000482714 AADACP22760 399 aa12.4□□□□□ -0.43
CCM2-215ENST00000482714 HERV-K104P61576 105 aa12.4□□□□□ -0.43
CCM2-215ENST00000482714 TAGLNQ01995 201 aaKnown RBP12.4□□□□□ -0.43
CCM2-215ENST00000482714 THNSL2Q86YJ6 484 aa12.4□□□□□ -0.43
CCM2-215ENST00000482714 TGIF2LXQ8IUE1 241 aa12.4□□□□□ -0.43
CCM2-215ENST00000482714 ZNF645Q8N7E2 425 aa12.4□□□□□ -0.43
CCM2-215ENST00000482714 RTN4IP1Q8WWV3 396 aaPredicted RBP12.4□□□□□ -0.43
CCM2-215ENST00000482714 TOMM40LQ969M1 308 aa12.4□□□□□ -0.43
CCM2-215ENST00000482714 ZNF251Q9BRH9 671 aa12.4□□□□□ -0.43
CCM2-215ENST00000482714 C7orf50Q9BRJ6 194 aaKnown RBP12.4□□□□□ -0.43
CCM2-215ENST00000482714 TINAGL1Q9GZM7 467 aaPredicted RBP12.4□□□□□ -0.43
CCM2-215ENST00000482714 DPAGT1Q9H3H5 408 aa12.4□□□□□ -0.43
CCM2-215ENST00000482714 SLC2A8Q9NY64 477 aa12.4□□□□□ -0.43
CCM2-215ENST00000482714 ZNRD1Q9P1U0 126 aa12.4□□□□□ -0.43
CCM2-215ENST00000482714 SCP2D1Q9UJQ7 156 aa12.4□□□□□ -0.43
CCM2-215ENST00000482714 POMT1Q9Y6A1 747 aa12.4□□□□□ -0.43
CCM2-215ENST00000482714 CENPXA8MT69 81 aa12.39□□□□□ -0.43
CCM2-215ENST00000482714 HSD17B6O14756 317 aa12.39□□□□□ -0.43
CCM2-215ENST00000482714 IFNA2P01563 188 aa12.39□□□□□ -0.43
CCM2-215ENST00000482714 ZNF735P0CB33 412 aa12.39□□□□□ -0.43
CCM2-215ENST00000482714 IL7P13232 177 aa12.39□□□□□ -0.43
CCM2-215ENST00000482714 MC5RP33032 325 aa12.39□□□□□ -0.43
CCM2-215ENST00000482714 HABP2Q14520 560 aaPredicted RBP12.39□□□□□ -0.43
CCM2-215ENST00000482714 LHFPL1Q86WI0 220 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms