RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 FAM172AQ8WUF8 416 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 RORBQ92753 470 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 CMBLQ96DG6 245 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 EBNA1BP2Q99848 306 aaKnown RBP2.42□□□□□ -2.02
SF3B1-210ENST00000482158 TAPBPLQ9BX59 468 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 PARVBQ9HBI1 364 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 XPNPEP1Q9NQW7 623 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 GID8Q9NWU2 228 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 GUCA1BQ9UMX6 200 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 LINC00588Q9Y4M8 146 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 NUP153P49790 1475 aaKnown RBP2.41□□□□□ -2.02
SF3B1-210ENST00000482158 ROCK2O75116 1388 aaKnown RBP2.41□□□□□ -2.02
SF3B1-210ENST00000482158 KIAA0232Q92628 1395 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 TRBV24-1A0A075B6N3 115 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.41□□□□□ -2.02
SF3B1-210ENST00000482158 A0A1B0GX12 115 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 A0A1W2PRG6 482 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 C9J4A7 227 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 FTCDNL1E5RQL4 147 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 F5H768 121 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 M0QZ92 97 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 LECT2O14960 151 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 SLC16A4O15374 487 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 TGOLN2O43493 480 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 EPPINO95925 133 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 SERPINA1P01009 418 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 ORM1P02763 201 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 ZNF22P17026 224 aaPredicted RBP2.41□□□□□ -2.02
SF3B1-210ENST00000482158 TMEM33P57088 247 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 MLLT11Q13015 90 aaPredicted RBP2.41□□□□□ -2.02
SF3B1-210ENST00000482158 ACSM3Q53FZ2 586 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 RBM48Q5RL73 367 aaKnown RBP2.41□□□□□ -2.02
SF3B1-210ENST00000482158 DNM1P34Q6PK57 102 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 DRAM2Q6UX65 266 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 LRRN1Q6UXK5 716 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 LYG2Q86SG7 212 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 KRTCAP2Q8N6L1 136 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 OR11G2Q8NGC1 345 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 PIGXQ8TBF5 258 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 KCTD4Q8WVF5 259 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 PPWD1Q96BP3 646 aaKnown RBP2.41□□□□□ -2.02
SF3B1-210ENST00000482158 RMND5BQ96G75 393 aaPredicted RBP2.41□□□□□ -2.02
SF3B1-210ENST00000482158 PRSS27Q9BQR3 290 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 HIGD2AQ9BW72 106 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 EBPLQ9BY08 206 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 TRABDQ9H4I3 376 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 CMTM6Q9NX76 183 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 SMPXQ9UHP9 88 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 KMT2EQ8IZD2 1858 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 NUP160Q12769 1436 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 PCNX2A6NKB5 2137 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 ABCB11O95342 1321 aa2.41□□□□□ -2.02
SF3B1-210ENST00000482158 MYH3P11055 1940 aa2.4□□□□□ -2.02
SF3B1-210ENST00000482158 FBN1P35555 2871 aaKnown RBP2.4□□□□□ -2.02
SF3B1-210ENST00000482158 SNAPC4Q5SXM2 1469 aa2.4□□□□□ -2.02
SF3B1-210ENST00000482158 CEP152O94986 1710 aa2.4□□□□□ -2.02
SF3B1-210ENST00000482158 NUP155O75694 1391 aa2.4□□□□□ -2.02
SF3B1-210ENST00000482158 MTUS2Q5JR59 1369 aa2.4□□□□□ -2.02
SF3B1-210ENST00000482158 TRAV8-2A0A0B4J237 113 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 J3QLI3 93 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 J3QRE1 110 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 FGF16O43320 207 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 CTSGP08311 255 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 PYCR1P32322 319 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 OMPP47874 163 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 CDK9P50750 372 aaKnown RBP2.4□□□□□ -2.03
SF3B1-210ENST00000482158 IDH3GP51553 393 aaPredicted RBP2.4□□□□□ -2.03
SF3B1-210ENST00000482158 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 C1QTNF8P60827 252 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 RANP62826 216 aaKnown RBP2.4□□□□□ -2.03
SF3B1-210ENST00000482158 SRSF6Q13247 344 aaKnown RBP2.4□□□□□ -2.03
SF3B1-210ENST00000482158 NDUFA5Q16718 116 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 CCDC58Q4VC31 144 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 OR10J3Q5JRS4 329 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 HACD4Q5VWC8 232 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 NIPAL1Q6NVV3 410 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 OLIG3Q7RTU3 272 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 MRPL52Q86TS9 123 aaKnown RBP2.4□□□□□ -2.03
SF3B1-210ENST00000482158 TRAPPC5Q8IUR0 188 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 FER1L6-AS1Q8NA97 138 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 LFNGQ8NES3 379 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 PXT1Q8NFP0 134 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 DYDC1Q8WWB3 177 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 IFT81Q8WYA0 676 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 CLDN23Q96B33 292 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 STACQ99469 402 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 NIPSNAP1Q9BPW8 284 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 HOPXQ9BPY8 73 aaPredicted RBP2.4□□□□□ -2.03
SF3B1-210ENST00000482158 ALX4Q9H161 411 aaPredicted RBP2.4□□□□□ -2.03
SF3B1-210ENST00000482158 CEP170Q5SW79 1584 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 MYH10P35580 1976 aa2.4□□□□□ -2.03
SF3B1-210ENST00000482158 DHX57Q6P158 1386 aaKnown RBP2.39□□□□□ -2.03
SF3B1-210ENST00000482158 C21orf140B9A014 251 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 CCRL2O00421 344 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 FABP7O15540 132 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 CRXO43186 299 aaPredicted RBP2.39□□□□□ -2.03
SF3B1-210ENST00000482158 ZNF73O43830 326 aaPredicted RBP2.39□□□□□ -2.03
SF3B1-210ENST00000482158 FADS1O60427 444 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 HPGDSO60760 199 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 SH2D1AO60880 128 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms