RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 C6orf62Q9GZU0 229 aaPredicted RBP12.15□□□□□ -0.46
ABCF3-213ENST00000480539 C11orf54Q9H0W9 315 aaPredicted RBP12.15□□□□□ -0.46
ABCF3-213ENST00000480539 EXTL2Q9UBQ6 330 aa12.15□□□□□ -0.46
ABCF3-213ENST00000480539 PITPNC1Q9UKF7 332 aa12.15□□□□□ -0.46
ABCF3-213ENST00000480539 CTDSP2O14595 271 aa12.14□□□□□ -0.47
ABCF3-213ENST00000480539 CBX5P45973 191 aa12.14□□□□□ -0.47
ABCF3-213ENST00000480539 ARPC4P59998 168 aa12.14□□□□□ -0.47
ABCF3-213ENST00000480539 HES1Q14469 280 aa12.14□□□□□ -0.47
ABCF3-213ENST00000480539 RPL39P5Q59GN2 51 aa12.14□□□□□ -0.47
ABCF3-213ENST00000480539 RNASE12Q5GAN4 147 aaKnown RBP12.14□□□□□ -0.47
ABCF3-213ENST00000480539 LIAT1Q6ZQX7 453 aa12.14□□□□□ -0.47
ABCF3-213ENST00000480539 HOGA1Q86XE5 327 aa12.14□□□□□ -0.47
ABCF3-213ENST00000480539 SNAPC3Q92966 411 aa12.14□□□□□ -0.47
ABCF3-213ENST00000480539 ANXA10Q9UJ72 324 aa12.14□□□□□ -0.47
ABCF3-213ENST00000480539 TMEM89A2RUT3 159 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 TXNL1O43396 289 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 LANCL1O43813 399 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 DIRAS3O95661 229 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 IGKV1D-33P01593 117 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 IGKV1-33P01594 117 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 HLA-DQB1P01920 261 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 LPLP06858 475 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 PRSS3P35030 304 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 RPL15P61313 204 aaKnown RBP12.13□□□□□ -0.47
ABCF3-213ENST00000480539 CNIH2Q6PI25 160 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 ZNF833PQ6ZTB9 187 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 H1FOOQ8IZA3 346 aaPredicted RBP12.13□□□□□ -0.47
ABCF3-213ENST00000480539 AGMATQ9BSE5 352 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 OR2D2Q9H210 308 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 RAB18Q9NP72 206 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 RNF150Q9ULK6 438 aa12.13□□□□□ -0.47
ABCF3-213ENST00000480539 ZNF736B4DX44 427 aaPredicted RBP12.12□□□□□ -0.47
ABCF3-213ENST00000480539 ZNF701M0R085 212 aaPredicted RBP12.12□□□□□ -0.47
ABCF3-213ENST00000480539 ITGB1BP1O14713 200 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 RAB29O14966 203 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 OR8U9P0C7N5 309 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 TMEM11P17152 192 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 MDKP21741 143 aaPredicted RBP12.12□□□□□ -0.47
ABCF3-213ENST00000480539 NFYAP23511 347 aaPredicted RBP12.12□□□□□ -0.47
ABCF3-213ENST00000480539 GPR12P47775 334 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 LSAMPQ13449 338 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 AWAT1Q58HT5 328 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 Q6ZSV7 163 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 OR8U1Q8NH10 309 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 MCFD2Q8NI22 146 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 SLC25A33Q9BSK2 321 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 TOLLIPQ9H0E2 274 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 PIPOXQ9P0Z9 390 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 ADAM30Q9UKF2 790 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 ANAPC10Q9UM13 185 aa12.12□□□□□ -0.47
ABCF3-213ENST00000480539 DPPA5A6NC42 116 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 FAM90A9PA6NNJ1 464 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 J3QRK9 145 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 OR2F2O95006 317 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 NDUFA7O95182 113 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 FAM106CPP0CH98 169 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 HABP2Q14520 560 aaPredicted RBP12.11□□□□□ -0.47
ABCF3-213ENST00000480539 HNF4GQ14541 408 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 FOXB2Q5VYV0 432 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 FAM71F2Q6NXP2 309 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 OR4C13Q8NGP0 309 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 S1PR3Q99500 378 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 NABP2Q9BQ15 211 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 ZNF251Q9BRH9 671 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 NPFFR1Q9GZQ6 430 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 ZNF221Q9UK13 617 aa12.11□□□□□ -0.47
ABCF3-213ENST00000480539 RBM7Q9Y580 266 aaKnown RBP12.11□□□□□ -0.47
ABCF3-213ENST00000480539 CTXN2P0C2S0 81 aa12.1□□□□□ -0.47
ABCF3-213ENST00000480539 FOXL1Q12952 345 aa12.1□□□□□ -0.47
ABCF3-213ENST00000480539 GLDNQ6ZMI3 551 aaPredicted RBP12.1□□□□□ -0.47
ABCF3-213ENST00000480539 OR4F5Q8NH21 305 aa12.1□□□□□ -0.47
ABCF3-213ENST00000480539 GPX8Q8TED1 209 aa12.1□□□□□ -0.47
ABCF3-213ENST00000480539 C5orf30Q96GV9 206 aa12.1□□□□□ -0.47
ABCF3-213ENST00000480539 RBM14Q96PK6 669 aaKnown RBP12.1□□□□□ -0.47
ABCF3-213ENST00000480539 NXF2Q9GZY0 626 aaKnown RBP12.1□□□□□ -0.47
ABCF3-213ENST00000480539 SCPEP1Q9HB40 452 aa12.1□□□□□ -0.47
ABCF3-213ENST00000480539 NECAP2Q9NVZ3 263 aa12.1□□□□□ -0.47
ABCF3-213ENST00000480539 SIGLEC9Q9Y336 463 aa12.1□□□□□ -0.47
ABCF3-213ENST00000480539 MOB4Q9Y3A3 225 aa12.1□□□□□ -0.47
ABCF3-213ENST00000480539 ANK2Q01484 3957 aa12.1□□□□□ -0.47
ABCF3-213ENST00000480539 COL6A5A8TX70 2615 aa12.09□□□□□ -0.47
ABCF3-213ENST00000480539 IGKV1D-13A0A0B4J2D9 117 aa12.09□□□□□ -0.47
ABCF3-213ENST00000480539 SH2D7A6NKC9 451 aaPredicted RBP12.09□□□□□ -0.47
ABCF3-213ENST00000480539 IGKV1-13P0DP09 117 aa12.09□□□□□ -0.47
ABCF3-213ENST00000480539 CD1BP29016 333 aa12.09□□□□□ -0.47
ABCF3-213ENST00000480539 CDK10Q15131 360 aa12.09□□□□□ -0.47
ABCF3-213ENST00000480539 FAM131AQ6UXB0 335 aa12.09□□□□□ -0.47
ABCF3-213ENST00000480539 C12orf54Q6X4T0 127 aa12.09□□□□□ -0.47
ABCF3-213ENST00000480539 C16orf82Q7Z2V1 217 aa12.09□□□□□ -0.47
ABCF3-213ENST00000480539 THNSL2Q86YJ6 484 aa12.09□□□□□ -0.47
ABCF3-213ENST00000480539 DRAXINQ8NBI3 349 aaPredicted RBP12.09□□□□□ -0.47
ABCF3-213ENST00000480539 DIRAS2Q96HU8 199 aa12.09□□□□□ -0.47
ABCF3-213ENST00000480539 EAF1Q96JC9 268 aaPredicted RBP12.09□□□□□ -0.47
ABCF3-213ENST00000480539 AKR1E2Q96JD6 320 aa12.09□□□□□ -0.47
ABCF3-213ENST00000480539 ZNF702PQ9H963 129 aa12.09□□□□□ -0.47
ABCF3-213ENST00000480539 EHFQ9NZC4 300 aa12.09□□□□□ -0.47
ABCF3-213ENST00000480539 M0R1X1 148 aa12.08□□□□□ -0.48
ABCF3-213ENST00000480539 MOSP00540 346 aa12.08□□□□□ -0.48
ABCF3-213ENST00000480539 PMP2P02689 132 aa12.08□□□□□ -0.48
ABCF3-213ENST00000480539 CT45A6P0DMU7 189 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms