RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 LRP11Q86VZ4 500 aa12.35□□□□□ -0.43
COL20A1-206ENST00000479501 A0A0G2JMM0 328 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 A0A1W2PPB8 328 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 A0A1W2PRS3 328 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 KIR3DP1A8MWS1 328 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 BMPR1BO00238 502 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 FBP1P09467 338 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 KLK2P20151 261 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 F2RP25116 425 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 SPINK9Q5DT21 86 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 ZNF385CQ66K41 422 aaPredicted RBP12.34□□□□□ -0.43
COL20A1-206ENST00000479501 LRFN3Q9BTN0 628 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 A0A1B0GU03 582 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 hADV38S2A0JD32 116 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 PSG2P11465 335 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 DDTP30046 118 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 NPBWR2P48146 333 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 OR1K1Q8NGR3 316 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 ADAMTS17Q8TE56 1095 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 MOB3AQ96BX8 217 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 GPR61Q9BZJ8 451 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 MANBALQ9NQG1 85 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 CRYM-AS1A6NIL9 109 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 CAMPP49913 170 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 RHOBP62745 196 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 ZNF552Q9H707 407 aaPredicted RBP12.34□□□□□ -0.43
COL20A1-206ENST00000479501 TANC1Q9C0D5 1861 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 ST8SIA5O15466 376 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 KLF7O75840 302 aaPredicted RBP12.34□□□□□ -0.43
COL20A1-206ENST00000479501 CELA3AP09093 270 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 GNB1P62873 340 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 ZFP36L1Q07352 338 aaKnown RBP12.34□□□□□ -0.43
COL20A1-206ENST00000479501 ZNF703Q9H7S9 590 aaPredicted RBP12.34□□□□□ -0.43
COL20A1-206ENST00000479501 DOK5Q9P104 306 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 SLC45A2Q9UMX9 530 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 NBASA2RRP1 2371 aa12.34□□□□□ -0.43
COL20A1-206ENST00000479501 EFNA2O43921 213 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 STUMQ69YW2 141 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 C19orf35Q6ZS72 473 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 MRPL30Q8TCC3 161 aaKnown RBP12.33□□□□□ -0.44
COL20A1-206ENST00000479501 RHOVQ96L33 236 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 TBX15Q96SF7 602 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 SCN8AQ9UQD0 1980 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 CLEC3BP05452 202 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 B2MP61769 119 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 P2RY6Q15077 328 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 RPEL1Q2QD12 228 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 ZBTB34Q8NCN2 500 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 LINC00470Q9BZP3 86 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 SYNGR3O43761 229 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 SPCS3P61009 180 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 HLA-DRB5Q30154 266 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 TMEM222Q9H0R3 208 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 GOLT1BQ9Y3E0 138 aa12.33□□□□□ -0.44
COL20A1-206ENST00000479501 PRR33A8MZF0 331 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 DEDDO75618 318 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 MRPS11P82912 194 aaKnown RBP12.32□□□□□ -0.44
COL20A1-206ENST00000479501 ELOBQ15370 118 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 SLC35E3Q7Z769 313 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 VN1R17PQ8TDU5 208 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 R3HDM4Q96D70 268 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 TIMP4Q99727 224 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 E9PQ18 207 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 PAGE4O60829 102 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 CD8AP01732 235 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 TCL1AP56279 114 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 FGF11Q92914 225 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 A8MXK9 166 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 AHRRA9YTQ3 701 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 MMP9P14780 707 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 RUNX1Q01196 453 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 NHLH1Q02575 133 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 C2orf68Q2NKX9 166 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 OR4S2Q8NH73 311 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 TMEM45BQ96B21 275 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 GAL3ST2Q9H3Q3 398 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 PIPOXQ9P0Z9 390 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 PQLC2LA1A4F0 135 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 CHRNB4P30926 498 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 HIST3H3Q16695 136 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 DHRS11Q6UWP2 260 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 SAXO1Q8IYX7 474 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 DTD1Q8TEA8 209 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 HIST1H2BAQ96A08 127 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 PKIBQ9C010 78 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 DLL3Q9NYJ7 618 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 HEATR5AQ86XA9 2040 aa12.32□□□□□ -0.44
COL20A1-206ENST00000479501 TTC28Q96AY4 2481 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 PLXNA4Q9HCM2 1894 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 TEX50A0A1B0GTY4 177 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 TCF21O43680 179 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 AQP10Q96PS8 301 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 SRD5A3Q9H8P0 318 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 AURKAIP1Q9NWT8 199 aaPredicted RBP12.31□□□□□ -0.44
COL20A1-206ENST00000479501 SEMA5BQ9P283 1151 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 RNF7Q9UBF6 113 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 CLDN16Q9Y5I7 305 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 DMRT1Q9Y5R6 373 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 hCG_38984A0A1B0GV85 526 aa12.31□□□□□ -0.44
COL20A1-206ENST00000479501 OR2H2O95918 312 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms