RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 OR3A1P47881 315 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 RPL30P62888 115 aaKnown RBP9.1□□□□□ -0.95
VPS52-217ENST00000478934 ELOBQ15370 118 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 TRIP6Q15654 476 aaKnown RBP9.1□□□□□ -0.95
VPS52-217ENST00000478934 RFESDQ8TAC1 157 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 NANOS1Q8WY41 292 aaKnown RBP9.1□□□□□ -0.95
VPS52-217ENST00000478934 YPEL4Q96NS1 127 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 SSX3Q99909 188 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 IFITM10A6NMD0 228 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 DEFB108AA8MXU0 73 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 AP4M1O00189 453 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 TAS2R30P59541 319 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 ZNF816Q0VGE8 651 aaPredicted RBP9.09□□□□□ -0.95
VPS52-217ENST00000478934 OR8G1Q15617 311 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 GABRA6Q16445 453 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 SPNS3Q6ZMD2 512 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 C11orf53Q8IXP5 236 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 C9orf106Q8NAJ2 232 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 GTF3AQ92664 365 aaKnown RBP9.09□□□□□ -0.95
VPS52-217ENST00000478934 OPA3Q9H6K4 179 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 TMEM9BQ9NQ34 198 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 PSENENQ9NZ42 101 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 METTL1Q9UBP6 276 aaKnown RBP9.09□□□□□ -0.95
VPS52-217ENST00000478934 HAND1O96004 215 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 KRASP01116 189 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 IGHV3-13P01766 116 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 IGHV3-7P01780 117 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 LTC4SQ16873 150 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 LINC00596Q86U02 117 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 MRGPRDQ8TDS7 321 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 GNPNAT1Q96EK6 184 aaPredicted RBP9.09□□□□□ -0.95
VPS52-217ENST00000478934 GMPPAQ96IJ6 420 aaPredicted RBP9.09□□□□□ -0.95
VPS52-217ENST00000478934 NIPSNAP3BQ9BS92 247 aa9.09□□□□□ -0.95
VPS52-217ENST00000478934 SEBOXQ9HB31 216 aaPredicted RBP9.09□□□□□ -0.95
VPS52-217ENST00000478934 A0A1B0GU03 582 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 UBE2L5PA0A1B0GUS4 154 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 C12orf77C9JDV5 145 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 PPIHO43447 177 aaKnown RBP9.08□□□□□ -0.96
VPS52-217ENST00000478934 SYNGR2O43760 224 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 IFNA5P01569 189 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 TRGC2P03986 189 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 G6PCP35575 357 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 CLEC12BQ2HXU8 276 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 SP5Q6BEB4 398 aaPredicted RBP9.08□□□□□ -0.96
VPS52-217ENST00000478934 LILRB2Q8N423 598 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 FGFRL1Q8N441 504 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 DEFB124Q8NES8 71 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 TMPRSS5Q9H3S3 457 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 SPTBN2O15020 2390 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 KALRNO60229 2985 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 SH2D1BO14796 132 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 PTBP3O95758 552 aaKnown RBP9.08□□□□□ -0.96
VPS52-217ENST00000478934 SMIM6P0DI80 62 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 MMP9P14780 707 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 SSTR5P35346 364 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 KIR2DL2P43627 348 aaPredicted RBP9.08□□□□□ -0.96
VPS52-217ENST00000478934 BRWD1-AS2P59051 145 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 TLE4Q04727 773 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 BAXQ07812 192 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 ZNF787Q6DD87 383 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 FAM214BQ7L5A3 538 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 TMEM178AQ8NBL3 297 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 EDARADDQ8WWZ3 215 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 IL22RA2Q969J5 263 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 OR2D2Q9H210 308 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 CLCF1Q9UBD9 225 aa9.08□□□□□ -0.96
VPS52-217ENST00000478934 ZFHX2Q9C0A1 2572 aaPredicted RBP9.07□□□□□ -0.96
VPS52-217ENST00000478934 DUXBA0A1W2PPF3 345 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 IFNA17P01571 189 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 S100A8P05109 93 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 BMP5P22003 454 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 CD200P41217 278 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 GLIPR1P48060 266 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 ZNF146Q15072 292 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 ZNF506Q5JVG8 444 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 WDR31Q8NA23 367 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 SCGB1C1Q8TD33 95 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 TVP23CQ96ET8 276 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 ABHD14BQ96IU4 210 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 ZNF251Q9BRH9 671 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 RYDENQ9NUL5 291 aaKnown RBP9.07□□□□□ -0.96
VPS52-217ENST00000478934 DOK5Q9P104 306 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 RIF1Q5UIP0 2472 aaKnown RBP9.07□□□□□ -0.96
VPS52-217ENST00000478934 ADGRG4Q8IZF6 3080 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 INTS1Q8N201 2190 aaKnown RBP9.07□□□□□ -0.96
VPS52-217ENST00000478934 A0A1B0GW64 132 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 S100GP29377 79 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 EIF2S3P41091 472 aaKnown RBP9.07□□□□□ -0.96
VPS52-217ENST00000478934 SPRNQ5BIV9 151 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 ZNF525Q8N782 197 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 NECAP1Q8NC96 275 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 GATAD1Q8WUU5 269 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 COQ2Q96H96 371 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 RCC1LQ96I51 464 aaKnown RBP9.07□□□□□ -0.96
VPS52-217ENST00000478934 OR4C12Q96R67 309 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 MBNL3Q9NUK0 354 aaKnown RBP9.07□□□□□ -0.96
VPS52-217ENST00000478934 CLN8Q9UBY8 286 aa9.07□□□□□ -0.96
VPS52-217ENST00000478934 HCFC1P51610 2035 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 LOC102723971A0A1B0GUV8 181 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 CEBPZOSA8MTT3 80 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms