RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 FADS2O95864 444 aaKnown RBP13.05□□□□□ -0.32
VIM-204ENST00000478746 GSTP1P09211 210 aaKnown RBP13.05□□□□□ -0.32
VIM-204ENST00000478746 SAA2P0DJI9 122 aaPredicted RBP13.05□□□□□ -0.32
VIM-204ENST00000478746 PPP3R1P63098 170 aa13.05□□□□□ -0.32
VIM-204ENST00000478746 GPR176Q14439 515 aa13.05□□□□□ -0.32
VIM-204ENST00000478746 TATDN3Q17R31 274 aa13.05□□□□□ -0.32
VIM-204ENST00000478746 ZNF562Q6V9R5 426 aa13.05□□□□□ -0.32
VIM-204ENST00000478746 C5orf24Q7Z6I8 188 aa13.05□□□□□ -0.32
VIM-204ENST00000478746 YPEL2Q96QA6 119 aa13.05□□□□□ -0.32
VIM-204ENST00000478746 PLEKHA3Q9HB20 300 aa13.05□□□□□ -0.32
VIM-204ENST00000478746 PCLOQ9Y6V0 5065 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 A0A0G2JLM5 398 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 IZUMO1RA6ND01 250 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 CA11O75493 328 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 CNIH1O95406 144 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 BRI3O95415 125 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 CSN3P07498 182 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 BDKRB2P30411 391 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 ALDH3A2P51648 485 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 HTD2P86397 168 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 MOGAT2Q3SYC2 334 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 GPR148Q8TDV2 347 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 ERVK13-1Q9NX77 482 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 SIGLEC8Q9NYZ4 499 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 AASSQ9UDR5 926 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 GMPPBQ9Y5P6 360 aa13.04□□□□□ -0.32
VIM-204ENST00000478746 CASQ2O14958 399 aaPredicted RBP13.03□□□□□ -0.32
VIM-204ENST00000478746 TPPPO94811 219 aa13.03□□□□□ -0.32
VIM-204ENST00000478746 MAS1P04201 325 aa13.03□□□□□ -0.32
VIM-204ENST00000478746 ALPLP05186 524 aa13.03□□□□□ -0.32
VIM-204ENST00000478746 ZIK1Q3SY52 487 aaPredicted RBP13.03□□□□□ -0.32
VIM-204ENST00000478746 LY6G6FQ5SQ64 297 aa13.03□□□□□ -0.32
VIM-204ENST00000478746 ZNF554Q86TJ5 538 aa13.03□□□□□ -0.32
VIM-204ENST00000478746 OR2AK2Q8NG84 335 aa13.03□□□□□ -0.32
VIM-204ENST00000478746 RGP1Q92546 391 aaPredicted RBP13.03□□□□□ -0.32
VIM-204ENST00000478746 TMEM106AQ96A25 262 aa13.03□□□□□ -0.32
VIM-204ENST00000478746 SLC29A1Q99808 456 aa13.03□□□□□ -0.32
VIM-204ENST00000478746 C8orf4Q9NR00 106 aa13.03□□□□□ -0.32
VIM-204ENST00000478746 MBNL3Q9NUK0 354 aaKnown RBP13.03□□□□□ -0.32
VIM-204ENST00000478746 UBE2QL1A1L167 161 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 H7C2Y5 167 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 SC5DO75845 299 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 CT45A6P0DMU7 189 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 CT45A5P0DMU8 189 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 CT45A7P0DMV0 189 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 FSTP19883 344 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 MC5RP33032 325 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 GTF2A1P52655 376 aaPredicted RBP13.02□□□□□ -0.33
VIM-204ENST00000478746 CD81P60033 236 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 OGFRL1Q5TC84 451 aaPredicted RBP13.02□□□□□ -0.33
VIM-204ENST00000478746 FAM71F2Q6NXP2 309 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 PACRGLQ8N7B6 248 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 POC5Q8NA72 575 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 OR5T1Q8NG75 326 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 GALMQ96C23 342 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 ZNF184Q99676 751 aaPredicted RBP13.02□□□□□ -0.33
VIM-204ENST00000478746 RNF5Q99942 180 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 NEURL2Q9BR09 285 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 ST6GALNAC5Q9BVH7 336 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 VCXQ9H320 206 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 AMBNQ9NP70 447 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 PIPOXQ9P0Z9 390 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 METTL1Q9UBP6 276 aaKnown RBP13.02□□□□□ -0.33
VIM-204ENST00000478746 LRRC42Q9Y546 428 aa13.02□□□□□ -0.33
VIM-204ENST00000478746 OR5H14A6NHG9 310 aa13.01□□□□□ -0.33
VIM-204ENST00000478746 H3BUA1 57 aa13.01□□□□□ -0.33
VIM-204ENST00000478746 RBBP9O75884 186 aa13.01□□□□□ -0.33
VIM-204ENST00000478746 CA2P00918 260 aa13.01□□□□□ -0.33
VIM-204ENST00000478746 GLAP06280 429 aa13.01□□□□□ -0.33
VIM-204ENST00000478746 FUT3P21217 361 aa13.01□□□□□ -0.33
VIM-204ENST00000478746 GLDNQ6ZMI3 551 aaPredicted RBP13.01□□□□□ -0.33
VIM-204ENST00000478746 DEFB125Q8N687 156 aa13.01□□□□□ -0.33
VIM-204ENST00000478746 Q96MT0 163 aa13.01□□□□□ -0.33
VIM-204ENST00000478746 SLC2A8Q9NY64 477 aa13.01□□□□□ -0.33
VIM-204ENST00000478746 PEF1Q9UBV8 284 aaKnown RBP13.01□□□□□ -0.33
VIM-204ENST00000478746 ADAM30Q9UKF2 790 aa13.01□□□□□ -0.33
VIM-204ENST00000478746 WASHC3Q9Y3C0 194 aa13.01□□□□□ -0.33
VIM-204ENST00000478746 H0YJW9 148 aa13□□□□□ -0.33
VIM-204ENST00000478746 RAB29O14966 203 aa13□□□□□ -0.33
VIM-204ENST00000478746 SLC22A1O15245 554 aa13□□□□□ -0.33
VIM-204ENST00000478746 GABRB1P18505 474 aa13□□□□□ -0.33
VIM-204ENST00000478746 MECP2P51608 486 aaKnown RBP13□□□□□ -0.33
VIM-204ENST00000478746 FXYD3Q14802 87 aa13□□□□□ -0.33
VIM-204ENST00000478746 PSG5Q15238 335 aa13□□□□□ -0.33
VIM-204ENST00000478746 RPL39P5Q59GN2 51 aa13□□□□□ -0.33
VIM-204ENST00000478746 RPL22L1Q6P5R6 122 aaKnown RBP13□□□□□ -0.33
VIM-204ENST00000478746 OR2K2Q8NGT1 345 aa13□□□□□ -0.33
VIM-204ENST00000478746 GRPEL2Q8TAA5 225 aa13□□□□□ -0.33
VIM-204ENST00000478746 ORAI1Q96D31 301 aa13□□□□□ -0.33
VIM-204ENST00000478746 IFI27L2Q9H2X8 130 aa13□□□□□ -0.33
VIM-204ENST00000478746 VCX3BQ9H321 246 aa13□□□□□ -0.33
VIM-204ENST00000478746 FAM90A7PA6NKC0 464 aa12.99□□□□□ -0.33
VIM-204ENST00000478746 FAM90A23PA8MXZ1 464 aa12.99□□□□□ -0.33
VIM-204ENST00000478746 ST8SIA5O15466 376 aa12.99□□□□□ -0.33
VIM-204ENST00000478746 GPX5O75715 221 aa12.99□□□□□ -0.33
VIM-204ENST00000478746 SNRPBP14678 240 aaKnown RBP12.99□□□□□ -0.33
VIM-204ENST00000478746 RPEL1Q2QD12 228 aa12.99□□□□□ -0.33
VIM-204ENST00000478746 CCDC58Q4VC31 144 aa12.99□□□□□ -0.33
VIM-204ENST00000478746 DMKNQ6E0U4 476 aaPredicted RBP12.99□□□□□ -0.33
VIM-204ENST00000478746 GLIPR1L1Q6UWM5 242 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms