RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 SLIRPQ9GZT3 109 aaKnown RBP10.56□□□□□ -0.72
TOP3A-205ENST00000477508 C11orf54Q9H0W9 315 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-205ENST00000477508 IFT46Q9NQC8 304 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 RDH8Q9NYR8 311 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 OR1A1Q9P1Q5 309 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 IGHV1-3A0A0C4DH29 117 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 A0A1B0GUS0 222 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 TMEM89A2RUT3 159 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 FAM90A9PA6NNJ1 464 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 TIMM23O14925 209 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 NDUFA7O95182 113 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 RAB13P51153 203 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 ARPC4P59998 168 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 LY6EQ16553 131 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 ZNF833PQ6ZTB9 187 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 MOB3BQ86TA1 216 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 DRAM1Q8N682 238 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.55□□□□□ -0.72
TOP3A-205ENST00000477508 OR4F5Q8NH21 305 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 MCFD2Q8NI22 146 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 CAPSLQ8WWF8 208 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 AGMATQ9BSE5 352 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 NXF2Q9GZY0 626 aaKnown RBP10.55□□□□□ -0.72
TOP3A-205ENST00000477508 IFI27L2Q9H2X8 130 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 EXTL2Q9UBQ6 330 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 ZNF221Q9UK13 617 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 A3GALT2U3KPV4 340 aa10.55□□□□□ -0.72
TOP3A-205ENST00000477508 IGKV1D-8A0A087WSZ0 117 aa10.54□□□□□ -0.72
TOP3A-205ENST00000477508 CTDSP2O14595 271 aa10.54□□□□□ -0.72
TOP3A-205ENST00000477508 ST8SIA5O15466 376 aa10.54□□□□□ -0.72
TOP3A-205ENST00000477508 CD1BP29016 333 aa10.54□□□□□ -0.72
TOP3A-205ENST00000477508 MRPS10P82664 201 aaKnown RBP10.54□□□□□ -0.72
TOP3A-205ENST00000477508 ODF3L1Q8IXM7 274 aa10.54□□□□□ -0.72
TOP3A-205ENST00000477508 H1FOOQ8IZA3 346 aaPredicted RBP10.54□□□□□ -0.72
TOP3A-205ENST00000477508 OR56B4Q8NH76 319 aa10.54□□□□□ -0.72
TOP3A-205ENST00000477508 GPX8Q8TED1 209 aa10.54□□□□□ -0.72
TOP3A-205ENST00000477508 CFHR4Q92496 578 aa10.54□□□□□ -0.72
TOP3A-205ENST00000477508 MDFIQ99750 246 aa10.54□□□□□ -0.72
TOP3A-205ENST00000477508 NPFFR1Q9GZQ6 430 aa10.54□□□□□ -0.72
TOP3A-205ENST00000477508 C6orf62Q9GZU0 229 aaPredicted RBP10.54□□□□□ -0.72
TOP3A-205ENST00000477508 MMP27Q9H306 513 aa10.54□□□□□ -0.72
TOP3A-205ENST00000477508 RANBP3Q9H6Z4 567 aaPredicted RBP10.54□□□□□ -0.72
TOP3A-205ENST00000477508 NECAP2Q9NVZ3 263 aa10.54□□□□□ -0.72
TOP3A-205ENST00000477508 ANAPC10Q9UM13 185 aa10.54□□□□□ -0.72
TOP3A-205ENST00000477508 GAB2Q9UQC2 676 aa10.54□□□□□ -0.72
TOP3A-205ENST00000477508 SAA2-SAA4A0A096LPE2 208 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 M0QZK8 103 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 SLC22A5O76082 557 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 SAA2P0DJI9 122 aaPredicted RBP10.53□□□□□ -0.72
TOP3A-205ENST00000477508 PTHLHP12272 177 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 NAT1P18440 290 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 GPR12P47775 334 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 REG1BP48304 166 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 COMPP49747 757 aaPredicted RBP10.53□□□□□ -0.72
TOP3A-205ENST00000477508 TAS2R46P59540 309 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 EBI3Q14213 229 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 DIAPH2-AS1Q14236 149 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 SNX29P2Q8IUI4 249 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 LAX1Q8IWV1 398 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 GVQW1Q8N7I0 195 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 OR5AP2Q8NGF4 316 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 OR4C13Q8NGP0 309 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 OR2T10Q8NGZ9 312 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 DIRAS2Q96HU8 199 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 MIXL1Q9H2W2 232 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 BEX1Q9HBH7 125 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 C1RLQ9NZP8 487 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 OR2W1Q9Y3N9 320 aa10.53□□□□□ -0.72
TOP3A-205ENST00000477508 RBM7Q9Y580 266 aaKnown RBP10.53□□□□□ -0.72
TOP3A-205ENST00000477508 DPPA5A6NC42 116 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 TSPAN9O75954 239 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 OR2F2O95006 317 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 SNRNP70P08621 437 aaKnown RBP10.52□□□□□ -0.73
TOP3A-205ENST00000477508 OR8U9P0C7N5 309 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 MC5RP33032 325 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 S100A5P33763 92 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 RCVRNP35243 200 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 OR3A3P47888 321 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 RAG2P55895 527 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 HES1Q14469 280 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 PYHIN1Q6K0P9 492 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 CCBE1Q6UXH8 406 aaPredicted RBP10.52□□□□□ -0.73
TOP3A-205ENST00000477508 TMEM219Q86XT9 240 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 OR8H1Q8NGG4 311 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 OR8U1Q8NH10 309 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 ABHD14BQ96IU4 210 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 RBM14Q96PK6 669 aaKnown RBP10.52□□□□□ -0.73
TOP3A-205ENST00000477508 DCUN1D5Q9BTE7 237 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 PARP12Q9H0J9 701 aaKnown RBP10.52□□□□□ -0.73
TOP3A-205ENST00000477508 C16orf95Q9H693 158 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 MMP24Q9Y5R2 645 aa10.52□□□□□ -0.73
TOP3A-205ENST00000477508 OR5H14A6NHG9 310 aa10.51□□□□□ -0.73
TOP3A-205ENST00000477508 CHST1O43916 411 aa10.51□□□□□ -0.73
TOP3A-205ENST00000477508 RBBP9O75884 186 aa10.51□□□□□ -0.73
TOP3A-205ENST00000477508 MOSP00540 346 aa10.51□□□□□ -0.73
TOP3A-205ENST00000477508 IGKV1D-33P01593 117 aa10.51□□□□□ -0.73
TOP3A-205ENST00000477508 IGKV1-33P01594 117 aa10.51□□□□□ -0.73
TOP3A-205ENST00000477508 OR5H8P0DN80 308 aa10.51□□□□□ -0.73
TOP3A-205ENST00000477508 TMEM11P17152 192 aa10.51□□□□□ -0.73
TOP3A-205ENST00000477508 CD24P25063 80 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms