RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 OR2M3Q8NG83 312 aa12.99□□□□□ -0.33
CLSTN1-205ENST00000477264 OR4B1Q8NGF8 309 aa12.99□□□□□ -0.33
CLSTN1-205ENST00000477264 RASL10BQ96S79 203 aa12.99□□□□□ -0.33
CLSTN1-205ENST00000477264 GAL3ST2Q9H3Q3 398 aa12.99□□□□□ -0.33
CLSTN1-205ENST00000477264 IGLV3-12A0A075B6K2 115 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 A0A0G2JRQ6 117 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 LILRA1O75019 489 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 CCL4P13236 92 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 YPEL3P61236 119 aaPredicted RBP12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 ATP6V1FQ16864 119 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 FAM78BQ5VT40 261 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 DMRTA1Q5VZB9 504 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 SHISA6Q6ZSJ9 500 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 HAPLN4Q86UW8 402 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 RIMS4Q9H426 269 aaPredicted RBP12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 METTL7AQ9H8H3 244 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 A0A0U1RQK1 487 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 ZNF320A2RRD8 509 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 HS3ST1O14792 307 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 GDF9O60383 454 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 MMP23AO75900 390 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 PTGDSP41222 190 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 SLC38A11Q08AI6 406 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 ARL16Q0P5N6 197 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 OR5I1Q13606 314 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 RPP25LQ8N5L8 163 aaKnown RBP12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 OR2AE1Q8NHA4 323 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 GMPPAQ96IJ6 420 aaPredicted RBP12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 OR4C12Q96R67 309 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 AURKAIP1Q9NWT8 199 aaPredicted RBP12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 ATP23Q9Y6H3 246 aa12.98□□□□□ -0.33
CLSTN1-205ENST00000477264 SIAH2O43255 324 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 SYNGR3O43761 229 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 PDE6DO43924 150 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 SYNGR4O95473 234 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 SERPINA7P05543 415 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 SOX8P57073 446 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 TCF15Q12870 199 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 PLCXD3Q63HM9 321 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 FAM180AQ6UWF9 173 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 SAXO1Q8IYX7 474 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 TMEM256Q8N2U0 113 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 NFAM1Q8NET5 270 aaPredicted RBP12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 CACNG5Q9UF02 275 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 ZNF816-ZNF321PA0A0X1KG74 233 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 UBE2L5PA0A1B0GUS4 154 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 hCG_38984A0A1B0GV85 526 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 RAB7AP51149 207 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 KRTAP27-1Q3LI81 207 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 C16orf47Q6ZP98 133 aaPredicted RBP12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 OR1F12Q8NHA8 337 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 ULBP2Q9BZM5 246 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 MSL2Q9HCI7 577 aa12.97□□□□□ -0.33
CLSTN1-205ENST00000477264 NPIPA2E9PIF3 369 aa12.96□□□□□ -0.33
CLSTN1-205ENST00000477264 NPIPA3F8WFD2 350 aa12.96□□□□□ -0.33
CLSTN1-205ENST00000477264 ITGB1BP1O14713 200 aa12.96□□□□□ -0.33
CLSTN1-205ENST00000477264 IAPPP10997 89 aa12.96□□□□□ -0.33
CLSTN1-205ENST00000477264 SELEP16581 610 aa12.96□□□□□ -0.33
CLSTN1-205ENST00000477264 GCH1P30793 250 aa12.96□□□□□ -0.33
CLSTN1-205ENST00000477264 WNT5AP41221 380 aa12.96□□□□□ -0.33
CLSTN1-205ENST00000477264 CLEC12BQ2HXU8 276 aa12.96□□□□□ -0.33
CLSTN1-205ENST00000477264 PHYHD1Q5SRE7 291 aa12.96□□□□□ -0.33
CLSTN1-205ENST00000477264 WFIKKN1Q96NZ8 548 aa12.96□□□□□ -0.33
CLSTN1-205ENST00000477264 TRBV6-6A0A0A6YYG2 114 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 F6UZH7 168 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 IGKV1D-33P01593 117 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 IGKV1-33P01594 117 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 SCTP09683 121 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 COX5AP20674 150 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 DAZAP2Q15038 168 aaPredicted RBP12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 TESK1Q15569 626 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 DCAF12Q5T6F0 453 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 CST9LP1Q5W188 147 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 Q6ZWC4 215 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 LINC01551Q86U37 167 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 ZNF611Q8N823 705 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 FADS6Q8N9I5 356 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 PRSS33Q8NF86 280 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 TMEM147Q9BVK8 224 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 RBM24Q9BX46 236 aaKnown RBP12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 SLC25A22Q9H936 323 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 DNAJC4Q9NNZ3 241 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 RYDENQ9NUL5 291 aaKnown RBP12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 ELOVL5Q9NYP7 299 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 OR2W1Q9Y3N9 320 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 LOXL2Q9Y4K0 774 aa12.96□□□□□ -0.34
CLSTN1-205ENST00000477264 KRASP01116 189 aa12.95□□□□□ -0.34
CLSTN1-205ENST00000477264 GNG10P50151 68 aa12.95□□□□□ -0.34
CLSTN1-205ENST00000477264 TMEM249Q2WGJ8 235 aa12.95□□□□□ -0.34
CLSTN1-205ENST00000477264 ANKRD37Q7Z713 158 aa12.95□□□□□ -0.34
CLSTN1-205ENST00000477264 C11orf42Q8N5U0 333 aa12.95□□□□□ -0.34
CLSTN1-205ENST00000477264 OR5P3Q8WZ94 311 aa12.95□□□□□ -0.34
CLSTN1-205ENST00000477264 SLC35E1Q96K37 410 aa12.95□□□□□ -0.34
CLSTN1-205ENST00000477264 TXNDC17Q9BRA2 123 aa12.95□□□□□ -0.34
CLSTN1-205ENST00000477264 COL25A1Q9BXS0 654 aaPredicted RBP12.95□□□□□ -0.34
CLSTN1-205ENST00000477264 WIPI2Q9Y4P8 454 aa12.95□□□□□ -0.34
CLSTN1-205ENST00000477264 TRBV11-1A0A0K0K1C0 115 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 TNFSF11O14788 317 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 PSG2P11465 335 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms