RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 CXCL3P19876 107 aa2.63□□□□□ -1.99
VPS50-212ENST00000476413 OPRM1P35372 400 aa2.63□□□□□ -1.99
VPS50-212ENST00000476413 HTR4Q13639 388 aa2.63□□□□□ -1.99
VPS50-212ENST00000476413 OR8K1Q8NGG5 319 aa2.63□□□□□ -1.99
VPS50-212ENST00000476413 ASB13Q8WXK3 278 aa2.63□□□□□ -1.99
VPS50-212ENST00000476413 OR51B6Q9H340 312 aa2.63□□□□□ -1.99
VPS50-212ENST00000476413 C11orf1Q9H5F2 150 aa2.63□□□□□ -1.99
VPS50-212ENST00000476413 DNAJC12Q9UKB3 198 aa2.63□□□□□ -1.99
VPS50-212ENST00000476413 HEY1Q9Y5J3 304 aa2.63□□□□□ -1.99
VPS50-212ENST00000476413 ATG2BQ96BY7 2078 aa2.63□□□□□ -1.99
VPS50-212ENST00000476413 C19orf71A6NCJ1 209 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 TP53I11O14683 189 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 OR4A8P0C604 315 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 LINC00614P0C842 121 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 UGT2B7P16662 529 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 AKR1C2P52895 323 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 HERVK_113P63121 156 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 HPCAP84074 193 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 COTL1Q14019 142 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 SPIN4Q56A73 249 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 ATP5L2Q7Z4Y8 100 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 NATD1Q8N6N6 113 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 TLCD1Q96CP7 247 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 FAM206AQ9NX38 181 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 HIVEP2P31629 2446 aa2.62□□□□□ -1.99
VPS50-212ENST00000476413 LINC00862A6NCI5 91 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 COPEO14579 308 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 ZW10O43264 779 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 STX10O60499 249 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 STK16O75716 305 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 CRYBA1P05813 215 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 IFNGR2P38484 337 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 CD79BP40259 229 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 TSPEAR-AS2P59090 65 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 SLC35A2P78381 396 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 MED21Q13503 144 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 ACSBG2Q5FVE4 666 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 FAM151BQ6UXP7 276 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 IQCF2Q8IXL9 164 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 DNAAF3Q8N9W5 541 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 CYGBQ8WWM9 190 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 PACRGQ96M98 296 aaPredicted RBP2.61□□□□□ -1.99
VPS50-212ENST00000476413 NSRP1Q9H0G5 558 aaKnown RBP2.61□□□□□ -1.99
VPS50-212ENST00000476413 SMDT1Q9H4I9 107 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 SPANXB1Q9NS25 103 aaPredicted RBP2.61□□□□□ -1.99
VPS50-212ENST00000476413 ZNHIT6Q9NWK9 470 aaKnown RBP2.61□□□□□ -1.99
VPS50-212ENST00000476413 TAS2R9Q9NYW1 312 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 PTPRJQ12913 1337 aa2.61□□□□□ -1.99
VPS50-212ENST00000476413 CHD5Q8TDI0 1954 aa2.6□□□□□ -1.99
VPS50-212ENST00000476413 MRASO14807 208 aa2.6□□□□□ -1.99
VPS50-212ENST00000476413 COX5BP10606 129 aa2.6□□□□□ -1.99
VPS50-212ENST00000476413 OR5C1Q8NGR4 320 aa2.6□□□□□ -1.99
VPS50-212ENST00000476413 GPR119Q8TDV5 335 aa2.6□□□□□ -1.99
VPS50-212ENST00000476413 EIF5A2Q9GZV4 153 aaKnown RBP2.6□□□□□ -1.99
VPS50-212ENST00000476413 AICDAQ9GZX7 198 aa2.6□□□□□ -1.99
VPS50-212ENST00000476413 A0A1W2PP64 1363 aa2.6□□□□□ -1.99
VPS50-212ENST00000476413 NAV1Q8NEY1 1877 aa2.59□□□□□ -1.99
VPS50-212ENST00000476413 A0A0A6YYH2 397 aa2.59□□□□□ -1.99
VPS50-212ENST00000476413 A6NJ64 397 aa2.59□□□□□ -1.99
VPS50-212ENST00000476413 SOD1P00441 154 aa2.59□□□□□ -1.99
VPS50-212ENST00000476413 NQO1P15559 274 aaKnown RBP2.59□□□□□ -1.99
VPS50-212ENST00000476413 CCDC112Q8NEF3 446 aa2.59□□□□□ -1.99
VPS50-212ENST00000476413 OR11H1Q8NG94 326 aa2.59□□□□□ -1.99
VPS50-212ENST00000476413 CMTM5Q96DZ9 223 aa2.59□□□□□ -1.99
VPS50-212ENST00000476413 CAPZA3Q96KX2 299 aa2.59□□□□□ -1.99
VPS50-212ENST00000476413 KCTD7Q96MP8 289 aa2.59□□□□□ -1.99
VPS50-212ENST00000476413 TBX5Q99593 518 aa2.59□□□□□ -1.99
VPS50-212ENST00000476413 CDCA4Q9BXL8 241 aa2.59□□□□□ -1.99
VPS50-212ENST00000476413 NOSIPQ9Y314 301 aaKnown RBP2.59□□□□□ -1.99
VPS50-212ENST00000476413 HDGFL3Q9Y3E1 203 aa2.59□□□□□ -1.99
VPS50-212ENST00000476413 THSD7AQ9UPZ6 1657 aa2.59□□□□□ -2
VPS50-212ENST00000476413 PLCH2O75038 1416 aa2.59□□□□□ -2
VPS50-212ENST00000476413 DSCAMO60469 2012 aa2.58□□□□□ -2
VPS50-212ENST00000476413 ODF3BA8MYP8 253 aa2.58□□□□□ -2
VPS50-212ENST00000476413 LY6HO94772 140 aa2.58□□□□□ -2
VPS50-212ENST00000476413 CD7P09564 240 aa2.58□□□□□ -2
VPS50-212ENST00000476413 ESDP10768 282 aa2.58□□□□□ -2
VPS50-212ENST00000476413 OR10J1P30954 320 aa2.58□□□□□ -2
VPS50-212ENST00000476413 ZNF117Q03924 483 aa2.58□□□□□ -2
VPS50-212ENST00000476413 ZNF567Q8N184 647 aa2.58□□□□□ -2
VPS50-212ENST00000476413 DDI1Q8WTU0 396 aa2.58□□□□□ -2
VPS50-212ENST00000476413 DERL2Q9GZP9 239 aa2.58□□□□□ -2
VPS50-212ENST00000476413 ZNF337Q9Y3M9 751 aa2.58□□□□□ -2
VPS50-212ENST00000476413 ALG5Q9Y673 324 aa2.58□□□□□ -2
VPS50-212ENST00000476413 MYO16Q9Y6X6 1858 aa2.58□□□□□ -2
VPS50-212ENST00000476413 CRYBB3P26998 211 aa2.57□□□□□ -2
VPS50-212ENST00000476413 SLC36A2Q495M3 483 aa2.57□□□□□ -2
VPS50-212ENST00000476413 RASL11AQ6T310 242 aa2.57□□□□□ -2
VPS50-212ENST00000476413 DHRS9Q9BPW9 319 aa2.57□□□□□ -2
VPS50-212ENST00000476413 TIPINQ9BVW5 301 aa2.57□□□□□ -2
VPS50-212ENST00000476413 HHLA2Q9UM44 414 aa2.57□□□□□ -2
VPS50-212ENST00000476413 CCL26Q9Y258 94 aa2.57□□□□□ -2
VPS50-212ENST00000476413 MINOS1-NBL1R4GNA1 71 aa2.57□□□□□ -2
VPS50-212ENST00000476413 TEX50A0A1B0GTY4 177 aa2.56□□□□□ -2
VPS50-212ENST00000476413 J3QRE1 110 aa2.56□□□□□ -2
VPS50-212ENST00000476413 HLA-DRAP01903 254 aa2.56□□□□□ -2
VPS50-212ENST00000476413 IL6P05231 212 aa2.56□□□□□ -2
VPS50-212ENST00000476413 CCL3P10147 92 aa2.56□□□□□ -2
VPS50-212ENST00000476413 CBR1P16152 277 aa2.56□□□□□ -2
VPS50-212ENST00000476413 BLVRBP30043 206 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms