RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 TIA1P31483 386 aaKnown RBP eCLIP5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 GALR1P47211 349 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 LHX2P50458 406 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 TAS2R46P59540 309 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 RND3P61587 244 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 KLRD1Q13241 179 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 FOXE3Q13461 319 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 ZNF260Q3ZCT1 412 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 ZNF385BQ569K4 471 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 STUMQ69YW2 141 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 ERASQ7Z444 233 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 DEFB123Q8N688 67 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 Q8N976 141 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 APCDD1LQ8NCL9 501 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 OR6T1Q8NGN1 323 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 OR2T10Q8NGZ9 312 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 OR4K13Q8NH42 304 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 STAG3L4Q8TBR4 150 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 OR51E1Q8TCB6 317 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 RASL10BQ96S79 203 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 MYADMQ96S97 322 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 SDF2Q99470 211 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 PMCHL2Q9BQD1 86 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 AGMATQ9BSE5 352 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 RTBDNQ9BSG5 229 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 GGTLC1Q9BX51 225 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 TMEM133Q9H2Q1 129 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 SDF2L1Q9HCN8 221 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 ENY2Q9NPA8 101 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 MANBALQ9NQG1 85 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 SIGLEC8Q9NYZ4 499 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 EHFQ9NZC4 300 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 ANXA10Q9UJ72 324 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 VDAC3Q9Y277 283 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 PIGLQ9Y2B2 252 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 WASHC3Q9Y3C0 194 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 PXMP4Q9Y6I8 212 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 SAA2-SAA4A0A096LPE2 208 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 A0A1B0GX51 115 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 TSPAN11A1L157 253 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 C7orf71A4D174 169 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 EEF1E1-BLOC1S5C9J1V9 151 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 F8W1H4 67 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 TMEM250H0YL14 139 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 K7N7A8 449 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 CDC42EP2O14613 210 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 EDIL3O43854 480 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 SLC16A7O60669 478 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 FCN3O75636 299 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 KRASP01116 189 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 RHOCP08134 193 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 HIST1H1CP16403 213 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 KLK2P20151 261 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 PMCHP20382 165 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 OPRM1P35372 400 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 CCR2P41597 374 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 GPR1P46091 355 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 RHOAP61586 193 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 HHEXQ03014 270 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 Q0VG73 95 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 PDE7AQ13946 482 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 IL11RAQ14626 422 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 ICAM4Q14773 271 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 CLEC12AQ5QGZ9 265 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 PLXDC2Q6UX71 529 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 TMEM25Q86YD3 366 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 UMODL1-AS1Q8N2C9 162 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 LRRC25Q8N386 305 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 KRTCAP2Q8N6L1 136 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 CYB561D1Q8N8Q1 229 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 OR52E2Q8NGJ4 325 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 OR4A5Q8NH83 315 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 PPTC7Q8NI37 304 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 JOSD2Q8TAC2 188 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 VSTM2AQ8TAG5 236 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 ST8SIA1Q92185 356 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 HPDLQ96IR7 371 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 GPR21Q99679 349 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 SRSF8Q9BRL6 282 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 LMF2Q9BU23 707 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 CHST6Q9GZX3 395 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 CMC2Q9NRP2 79 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 TMEM74BQ9NUR3 256 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 KLHL13Q9P2N7 655 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 SLC2A6Q9UGQ3 507 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 TRAPPC1Q9Y5R8 145 aa5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 COL2A1P02458 1487 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-215ENST00000475319 TNRC18O15417 2968 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-215ENST00000475319 CITO14578 2027 aa5.06□□□□□ -1.6
ECHDC1-215ENST00000475319 PATJQ8NI35 1801 aa5.06□□□□□ -1.6
ECHDC1-215ENST00000475319 TRAV36DV7A0A075B6V5 113 aa5.06□□□□□ -1.6
ECHDC1-215ENST00000475319 KBTBD11-OT1A0A1B0GTJ5 212 aa5.06□□□□□ -1.6
ECHDC1-215ENST00000475319 FAM231BA6NCW3 169 aa5.06□□□□□ -1.6
ECHDC1-215ENST00000475319 MEIS3P1A6NDR6 274 aa5.06□□□□□ -1.6
ECHDC1-215ENST00000475319 DPRXA6NFQ7 191 aa5.06□□□□□ -1.6
ECHDC1-215ENST00000475319 DDTLA6NHG4 134 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-215ENST00000475319 OTOL1A6NHN0 477 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-215ENST00000475319 MSGN1A6NI15 193 aa5.06□□□□□ -1.6
ECHDC1-215ENST00000475319 ZNF736B4DX44 427 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-215ENST00000475319 J3KT08 172 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms