RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CORTO00230 105 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 LY6EQ16553 131 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 OR8G5Q8NG78 346 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 RBM38Q9H0Z9 239 aaKnown RBP9.51□□□□□ -0.89
VAPB-204ENST00000475243 IL36RNQ9UBH0 155 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 METTL1Q9UBP6 276 aaKnown RBP9.51□□□□□ -0.89
VAPB-204ENST00000475243 RBBP6Q7Z6E9 1792 aaKnown RBP9.51□□□□□ -0.89
VAPB-204ENST00000475243 REG1AP05451 166 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 RRN3P1Q2M238 152 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 SIRT4Q9Y6E7 314 aaPredicted RBP9.5□□□□□ -0.89
VAPB-204ENST00000475243 ATP6V0CP27449 155 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 SSTR5P35346 364 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 NUBP1P53384 320 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 CCDC144NLQ6NUI1 221 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 SLC25A45Q8N413 288 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 OR5AU1Q8NGC0 362 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 OR1N2Q8NGR9 330 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 IGHV3OR16-10A0A075B7F0 116 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 FCGR3AP08637 254 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 LINC00596Q86U02 117 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 OR4A5Q8NH83 315 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 A0A087X0M5 115 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 A0A1B0GX30 115 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 RUNX1Q01196 453 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 SSX8Q7RTT4 187 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 TMEM191AQ9H0A3 160 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 CACNA1GO43497 2377 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 ISLRO14498 428 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 RNASE1P07998 156 aaKnown RBP9.5□□□□□ -0.89
VAPB-204ENST00000475243 KIR3DL2P43630 455 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 FAM214BQ7L5A3 538 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 PTX4Q96A99 478 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 ZIC3O60481 467 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 SFTPCP11686 197 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 NMUP48645 174 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 CEACAM21Q3KPI0 293 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 MRGPRGQ86SM5 289 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 IFT22Q9H7X7 185 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 CNOT1A5YKK6 2376 aaKnown RBP9.5□□□□□ -0.89
VAPB-204ENST00000475243 C7orf77A4D0Y5 90 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 EIF3GO75821 320 aaKnown RBP eCLIP9.5□□□□□ -0.89
VAPB-204ENST00000475243 ZNF502Q8TBZ5 544 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 CYB5R1Q9UHQ9 305 aa9.5□□□□□ -0.89
VAPB-204ENST00000475243 PHF3Q92576 2039 aaKnown RBP9.49□□□□□ -0.89
VAPB-204ENST00000475243 IGHV3-48P01763 117 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 ZNF738Q8NE65 137 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 STRCP1A6NGW2 1772 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 UBE2L6O14933 153 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 SIGLEC5O15389 551 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 PLA2G10O15496 165 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 OR2H2O95918 312 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 CTSBP07858 339 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 TMPRSS3P57727 454 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 C9orf62Q8N4C0 152 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 NFAM1Q8NET5 270 aaPredicted RBP9.49□□□□□ -0.89
VAPB-204ENST00000475243 BRWD3Q6RI45 1802 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 FAM106CPP0CH98 169 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 MMP9P14780 707 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 HOXC8P31273 242 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 PLAURQ03405 335 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 PACRGQ96M98 296 aaPredicted RBP9.49□□□□□ -0.89
VAPB-204ENST00000475243 PARP14Q460N5 1801 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 FBLL1A6NHQ2 334 aaKnown RBP9.49□□□□□ -0.89
VAPB-204ENST00000475243 SS18L1O75177 396 aaPredicted RBP9.49□□□□□ -0.89
VAPB-204ENST00000475243 KLF7O75840 302 aaPredicted RBP9.49□□□□□ -0.89
VAPB-204ENST00000475243 HIST1H1BP16401 226 aaKnown RBP9.49□□□□□ -0.89
VAPB-204ENST00000475243 CDCP2Q5VXM1 449 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 PXMP4Q9Y6I8 212 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 HYPMO75409 117 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 MMP16P51512 607 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 SIGIRRQ6IA17 410 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 GAPDHP04406 335 aaKnown RBP9.49□□□□□ -0.89
VAPB-204ENST00000475243 ID4P47928 161 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 GABRA6Q16445 453 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 HOGA1Q86XE5 327 aa9.49□□□□□ -0.89
VAPB-204ENST00000475243 MRPL30Q8TCC3 161 aaKnown RBP9.49□□□□□ -0.89
VAPB-204ENST00000475243 SF3B6Q9Y3B4 125 aaKnown RBP9.49□□□□□ -0.89
VAPB-204ENST00000475243 ZNF646O15015 1829 aaPredicted RBP9.49□□□□□ -0.89
VAPB-204ENST00000475243 FAM27BQ5VT28 67 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 EBLN2Q6P2I7 272 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 NPVFQ9HCQ7 196 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 IZUMO4Q1ZYL8 232 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 LRRC75BQ2VPJ9 315 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 ASAH2BP0C7U1 165 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 FCGR2BP31994 310 aaPredicted RBP9.48□□□□□ -0.89
VAPB-204ENST00000475243 MFAP2P55001 183 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 ARF6P62330 175 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 LYRM7Q5U5X0 104 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 ZBTB34Q8NCN2 500 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 OR10J6PQ8NGY7 276 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 OR4C12Q96R67 309 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 METTL26Q96S19 204 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 TSPAN2O60636 221 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 RPL27AP46776 148 aaKnown RBP9.48□□□□□ -0.89
VAPB-204ENST00000475243 VKORC1L1Q8N0U8 176 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 DPH3Q96FX2 82 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 OR5AC2Q9NZP5 309 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 SPTBN2O15020 2390 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 FGF12P61328 243 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 OR4B1Q8NGF8 309 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms