RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TMEM234Q8WY98 164 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 OR4C12Q96R67 309 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 NECAP2Q9NVZ3 263 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 TECRQ9NZ01 308 aaKnown RBP3.42□□□□□ -1.86
USP16-205ENST00000474835 CUBNO60494 3623 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 C13orf42A0A1B0GVH6 325 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 M0QZ24 198 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 DHRS3O75911 302 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 OR5G3P0C626 314 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 NPY1RP25929 384 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 BMI1P35226 326 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 HHEXQ03014 270 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 ELAVL3Q14576 367 aaKnown RBP3.42□□□□□ -1.86
USP16-205ENST00000474835 SBSPONQ8IVN8 264 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 ZFP62Q8NB50 900 aaPredicted RBP3.42□□□□□ -1.86
USP16-205ENST00000474835 OR1L1Q8NH94 360 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 ZCCHC10Q8TBK6 192 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 RTN4IP1Q8WWV3 396 aaPredicted RBP3.42□□□□□ -1.86
USP16-205ENST00000474835 FAM3CQ92520 227 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 NEIL1Q96FI4 390 aaPredicted RBP3.42□□□□□ -1.86
USP16-205ENST00000474835 SFRP2Q96HF1 295 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 LOXL4Q96JB6 756 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 RAB40CQ96S21 281 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 HDHD3Q9BSH5 251 aaPredicted RBP3.42□□□□□ -1.86
USP16-205ENST00000474835 RSG1Q9BU20 258 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 PRSS22Q9GZN4 317 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 GNB4Q9HAV0 340 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 COA3Q9Y2R0 106 aaPredicted RBP3.42□□□□□ -1.86
USP16-205ENST00000474835 DMXL2Q8TDJ6 3036 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 CTXND1A0A1B0GTU2 59 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 hCG_38984A0A1B0GV85 526 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 FAM230AA0A1W2PPH8 454 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 C17orf98A8MV24 154 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 CD5LO43866 347 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 RENP00797 406 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 PPYP01298 95 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 TLX1P31314 330 aaPredicted RBP3.42□□□□□ -1.86
USP16-205ENST00000474835 GFRA1P56159 465 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 PDZD11Q5EBL8 140 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 FAM69BQ5VUD6 431 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 CDCP2Q5VXM1 449 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 C19orf35Q6ZS72 473 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 TMPRSS7Q7RTY8 843 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 COX8CQ7Z4L0 72 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 BOD1L2Q8IYS8 172 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 CMTM1Q8IZ96 169 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 NHLRC2Q8NBF2 726 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 OR6K6Q8NGW6 343 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 TAF15Q92804 592 aaKnown RBP eCLIP3.42□□□□□ -1.86
USP16-205ENST00000474835 HEBP2Q9Y5Z4 205 aa3.42□□□□□ -1.86
USP16-205ENST00000474835 C17orf51A8MQB3 221 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 TCF21O43680 179 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 UTS2O95399 124 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 PRNPP04156 253 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 STAG3L2P0CL84 134 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 STAG3L3P0CL85 134 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 IGLL1P15814 213 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 CCNOP22674 350 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 FOXA3P55318 350 aaPredicted RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 TMEM267Q0VDI3 215 aaPredicted RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 C9orf135Q5VTT2 229 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 RHBDD2Q6NTF9 364 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 CXCL17Q6UXB2 119 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 FAM57BQ71RH2 274 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 VASH2Q86V25 355 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 ABHD12Q8N2K0 398 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 IL22RA1Q8N6P7 574 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 ZNF321PQ8N8H1 164 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 MRPL30Q8TCC3 161 aaKnown RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 GATAD1Q8WUU5 269 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 CLUHP3Q96NS8 147 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 MTIF3Q9H2K0 278 aaKnown RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 ST20Q9HBF5 79 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 OR2S2Q9NQN1 319 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 EHFQ9NZC4 300 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 TBC1D29Q9UFV1 150 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 UBE2J1Q9Y385 318 aaPredicted RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 LOXL2Q9Y4K0 774 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 U3KQK5 164 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 PRRC2CQ9Y520 2896 aaKnown RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 TRBV6-1A0A0K0K1D8 114 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 A0A1W2PQ45 241 aaPredicted RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 A0A1W2PQY0 241 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 ZNF891A8MT65 544 aaPredicted RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 ZNF878C9JN71 531 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 LINC01619G3V211 115 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 H0YGG7 62 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 STMND1H3BQB6 276 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 M0QXV9 152 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 TNFRSF10CO14798 259 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 SMAD9O15198 467 aaKnown RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 PDE6DO43924 150 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 ZNF324O75467 553 aaPredicted RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 PGLYRP1O75594 196 aaPredicted RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 TNFSF4P23510 183 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 SELENOVP59797 346 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 ARF3P61204 181 aaPredicted RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 ERVK11-1P61568 191 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 PRR20EP86478 221 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 PRR20CP86479 221 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms