RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 HNF4GQ14541 408 aa12.05□□□□□ -0.48
VARS-223ENST00000474643 MOGAT2Q3SYC2 334 aa12.05□□□□□ -0.48
VARS-223ENST00000474643 PLAC9Q5JTB6 97 aa12.05□□□□□ -0.48
VARS-223ENST00000474643 UBE2NLQ5JXB2 153 aa12.05□□□□□ -0.48
VARS-223ENST00000474643 KPRPQ5T749 579 aaPredicted RBP12.05□□□□□ -0.48
VARS-223ENST00000474643 FAM53AQ6NSI3 398 aaPredicted RBP12.05□□□□□ -0.48
VARS-223ENST00000474643 DRAM1Q8N682 238 aa12.05□□□□□ -0.48
VARS-223ENST00000474643 OR52L2PQ8NGH6 319 aa12.05□□□□□ -0.48
VARS-223ENST00000474643 LGALS14Q8TCE9 139 aa12.05□□□□□ -0.48
VARS-223ENST00000474643 RABL2AQ9UBK7 228 aaPredicted RBP12.05□□□□□ -0.48
VARS-223ENST00000474643 JPT1Q9UK76 154 aa12.05□□□□□ -0.48
VARS-223ENST00000474643 RABL2BQ9UNT1 228 aa12.05□□□□□ -0.48
VARS-223ENST00000474643 PSMB11A5LHX3 300 aa12.04□□□□□ -0.48
VARS-223ENST00000474643 FOXI3A8MTJ6 420 aaPredicted RBP12.04□□□□□ -0.48
VARS-223ENST00000474643 SERPINE3A8MV23 424 aa12.04□□□□□ -0.48
VARS-223ENST00000474643 NUDT19A8MXV4 375 aa12.04□□□□□ -0.48
VARS-223ENST00000474643 HSPA12AO43301 675 aa12.04□□□□□ -0.48
VARS-223ENST00000474643 NAPSAO96009 420 aa12.04□□□□□ -0.48
VARS-223ENST00000474643 CD83Q01151 205 aa12.04□□□□□ -0.48
VARS-223ENST00000474643 HMGN3Q15651 99 aa12.04□□□□□ -0.48
VARS-223ENST00000474643 FBLN7Q53RD9 439 aa12.04□□□□□ -0.48
VARS-223ENST00000474643 C5orf24Q7Z6I8 188 aa12.04□□□□□ -0.48
VARS-223ENST00000474643 MOB3BQ86TA1 216 aa12.04□□□□□ -0.48
VARS-223ENST00000474643 OR8H3Q8N146 312 aa12.04□□□□□ -0.48
VARS-223ENST00000474643 DPF1Q92782 380 aa12.04□□□□□ -0.48
VARS-223ENST00000474643 S100A16Q96FQ6 103 aaKnown RBP12.04□□□□□ -0.48
VARS-223ENST00000474643 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.04□□□□□ -0.48
VARS-223ENST00000474643 RHBDL2Q9NX52 303 aa12.04□□□□□ -0.48
VARS-223ENST00000474643 PLXNB1O43157 2135 aa12.04□□□□□ -0.48
VARS-223ENST00000474643 LY6LH3BQJ8 138 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 HSD17B6O14756 317 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 GAPDHP04406 335 aaKnown RBP12.03□□□□□ -0.48
VARS-223ENST00000474643 IGLL1P15814 213 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 HIST1H1DP16402 221 aaKnown RBP12.03□□□□□ -0.48
VARS-223ENST00000474643 PPP1CCP36873 323 aaKnown RBP12.03□□□□□ -0.48
VARS-223ENST00000474643 REG1BP48304 166 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 SLC35B1P78383 322 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 HLA-DRB3P79483 266 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 HTD2P86397 168 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 GNMTQ14749 295 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 Q3ZCU0 254 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 MORN2Q502X0 79 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 LINC00311Q8N616 119 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 C8orf31Q8N9H6 132 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 C15orf40Q8WUR7 153 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 Q9N2K0 584 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 DIABLOQ9NR28 239 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 ADAM30Q9UKF2 790 aa12.03□□□□□ -0.48
VARS-223ENST00000474643 TRBV6-6A0A0A6YYG2 114 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 NCBP2LA6PVI3 153 aaKnown RBP12.02□□□□□ -0.49
VARS-223ENST00000474643 ADARB2-AS1A8MUL3 147 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 RAB27BO00194 218 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 SLC31A2O15432 143 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 IGKV1D-33P01593 117 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 IGKV1-33P01594 117 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 STEAP3Q658P3 488 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 ZNF880Q6PDB4 577 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 SLC25A48Q6ZT89 311 aaKnown RBP12.02□□□□□ -0.49
VARS-223ENST00000474643 FOXRED2Q8IWF2 684 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 SAMD12Q8N8I0 201 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 OR2AK2Q8NG84 335 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 MCFD2Q8NI22 146 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 WIPF2Q8TF74 440 aaPredicted RBP12.02□□□□□ -0.49
VARS-223ENST00000474643 CHPT1Q8WUD6 406 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 SLC25A38Q96DW6 304 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 ABHD14AQ9BUJ0 271 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 COMMD3Q9UBI1 195 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 SLC23A1Q9UHI7 598 aa12.02□□□□□ -0.49
VARS-223ENST00000474643 TRDCB7Z8K6 153 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 XRCC3O43542 346 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 YPEL1O60688 119 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 DIAPH2-AS1Q14236 149 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 CDNFQ49AH0 187 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 CT45A1Q5HYN5 189 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 Q6ZPA2 131 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 SLC35E3Q7Z769 313 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 THNSL2Q86YJ6 484 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 TGIF2LXQ8IUE1 241 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 OR5H6Q8NGV6 325 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 CT45A3Q8NHU0 189 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 RCC1LQ96I51 464 aaKnown RBP12.01□□□□□ -0.49
VARS-223ENST00000474643 YPEL2Q96QA6 119 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 GPR61Q9BZJ8 451 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 AURKAIP1Q9NWT8 199 aaPredicted RBP12.01□□□□□ -0.49
VARS-223ENST00000474643 PTTG2Q9NZH5 202 aa12.01□□□□□ -0.49
VARS-223ENST00000474643 IGHV1-3A0A0C4DH29 117 aa12□□□□□ -0.49
VARS-223ENST00000474643 A0A1W2PPI3 338 aa12□□□□□ -0.49
VARS-223ENST00000474643 MFNGO00587 321 aa12□□□□□ -0.49
VARS-223ENST00000474643 FGF16O43320 207 aa12□□□□□ -0.49
VARS-223ENST00000474643 DUS4LO95620 317 aaKnown RBP12□□□□□ -0.49
VARS-223ENST00000474643 FCGR3AP08637 254 aa12□□□□□ -0.49
VARS-223ENST00000474643 GSTP1P09211 210 aaKnown RBP12□□□□□ -0.49
VARS-223ENST00000474643 SCTP09683 121 aa12□□□□□ -0.49
VARS-223ENST00000474643 ZBTB25P24278 435 aa12□□□□□ -0.49
VARS-223ENST00000474643 ZNF134P52741 427 aa12□□□□□ -0.49
VARS-223ENST00000474643 GNG2P59768 71 aa12□□□□□ -0.49
VARS-223ENST00000474643 ZNF816Q0VGE8 651 aaPredicted RBP12□□□□□ -0.49
VARS-223ENST00000474643 KIR2DS1Q14954 304 aa12□□□□□ -0.49
VARS-223ENST00000474643 ZNF329Q86UD4 541 aa12□□□□□ -0.49
VARS-223ENST00000474643 IZUMO1Q8IYV9 350 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms