RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 IAH1Q2TAA2 248 aaPredicted RBP4.73□□□□□ -1.65
RTF1-203ENST00000473214 ZNF441Q8N8Z8 693 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 GPR26Q8NDV2 337 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 OR10G8Q8NGN5 311 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 MBD3L1Q8WWY6 194 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 REEP6Q96HR9 211 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 CNBD2Q96M20 576 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 CCDC115Q96NT0 180 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 RNF157Q96PX1 679 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 ZNF382Q96SR6 550 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 EBPLQ9BY08 206 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 PITPNM3Q9BZ71 974 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 ZDHHC11Q9H8X9 412 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 FAIMQ9NVQ4 179 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 MRPL27Q9P0M9 148 aaKnown RBP4.73□□□□□ -1.65
RTF1-203ENST00000473214 MTFP1Q9UDX5 166 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 RSL24D1Q9UHA3 163 aaKnown RBP4.73□□□□□ -1.65
RTF1-203ENST00000473214 GLS2Q9UI32 602 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 YTHDF2Q9Y5A9 579 aaKnown RBP4.73□□□□□ -1.65
RTF1-203ENST00000473214 COL4A3Q01955 1670 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 RALGAPA2Q2PPJ7 1873 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 MYH8P13535 1937 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 GREB1LQ9C091 1923 aaPredicted RBP4.72□□□□□ -1.65
RTF1-203ENST00000473214 MTCL1Q9Y4B5 1905 aaKnown RBP4.72□□□□□ -1.65
RTF1-203ENST00000473214 IGLV5-37A0A075B6J1 123 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 A0A087WX48 190 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 A0A0G2JRQ6 117 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 hADV38S2A0JD32 116 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 TRAPPC13A5PLN9 417 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 OR2A4O95047 310 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 TNFSF15O95150 251 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 CDRT1O95170 752 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 TSHBP01222 138 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 MDH2P40926 338 aaKnown RBP4.72□□□□□ -1.65
RTF1-203ENST00000473214 NDUFA8P51970 172 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 RPS20P60866 119 aaKnown RBP4.72□□□□□ -1.65
RTF1-203ENST00000473214 NEDD8Q15843 81 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 LTC4SQ16873 150 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 CNPY1Q3B7I2 92 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 ATP6AP1LQ52LC2 224 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 STEAP4Q687X5 459 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 ZFAND6Q6FIF0 208 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 AGTRAPQ6RW13 159 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 IGFL2Q6UWQ7 119 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 STRADAQ7RTN6 431 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 LRRTM1Q86UE6 522 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 PPP1R27Q86WC6 154 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 RAB42Q8N4Z0 105 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 NPWQ8N729 165 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 OR2T4Q8NH00 348 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 ZNF675Q8TD23 568 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 NPRL2Q8WTW4 380 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 SECTM1Q8WVN6 248 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 CANT1Q8WVQ1 401 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 CHCHD10Q8WYQ3 142 aaPredicted RBP4.72□□□□□ -1.65
RTF1-203ENST00000473214 APOBEC3DQ96AK3 386 aaPredicted RBP4.72□□□□□ -1.65
RTF1-203ENST00000473214 C18orf12Q96KH6 178 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 OR2M2Q96R28 347 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 OR2A7Q96R45 310 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 RNF126Q9BV68 326 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 SRXN1Q9BYN0 137 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 SELENOIQ9C0D9 397 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 SH3BGRL3Q9H299 93 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 ACER3Q9NUN7 267 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 OCIAD1Q9NX40 245 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 PCYOX1Q9UHG3 505 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 FAM208BQ5VWN6 2430 aa4.72□□□□□ -1.65
RTF1-203ENST00000473214 BAZ2AQ9UIF9 1905 aaKnown RBP4.72□□□□□ -1.65
RTF1-203ENST00000473214 ANKRD11Q6UB99 2663 aaPredicted RBP4.71□□□□□ -1.65
RTF1-203ENST00000473214 BORCS7-ASMTA0A0B4J1R7 106 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 TMEM189A5PLL7 270 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 G3V2L1 256 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 GYG2O15488 501 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 ZZEF1O43149 2961 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 ZNF207O43670 478 aaKnown RBP4.71□□□□□ -1.66
RTF1-203ENST00000473214 EDIL3O43854 480 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 NDUFS5O43920 106 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 SPAG7O75391 227 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 LYPLA1O75608 230 aaPredicted RBP4.71□□□□□ -1.66
RTF1-203ENST00000473214 DHRS3O75911 302 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 ZFAND5O76080 213 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 CDS2O95674 445 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 ATP5G1P05496 136 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 H2AFZP0C0S5 128 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 ZNF806P0C7X5 589 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 MPC1LP0DKB6 136 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 ERGP11308 486 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 KLK2P20151 261 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 VDAC1P21796 283 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 CDK2P24941 298 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 FMO3P31513 532 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 PRSS3P35030 304 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 PSMB2P49721 201 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 RARRES1P49788 294 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 WNT4P56705 351 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 ERVK-16P61578 105 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 RELAQ04206 551 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 OR8B8Q15620 311 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 GSG1Q2KHT4 349 aa4.71□□□□□ -1.66
RTF1-203ENST00000473214 ZNF718Q3SXZ3 478 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms