RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 OR6C6A6NF89 314 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 C19orf84I3L1E1 186 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 SSSCA1O60232 199 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 WISP2O76076 250 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 TOMM40O96008 361 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 HLA-HP01893 362 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 CD55P08174 381 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 HOXB4P17483 251 aaPredicted RBP8.62□□□□□ -1.03
APTX-216ENST00000472896 FOLR3P41439 243 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 RPS20P60866 119 aaKnown RBP8.62□□□□□ -1.03
APTX-216ENST00000472896 RPL15P61313 204 aaKnown RBP8.62□□□□□ -1.03
APTX-216ENST00000472896 GNB2P62879 340 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 KISS1Q15726 138 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 ABHD12BQ7Z5M8 362 aaPredicted RBP8.62□□□□□ -1.03
APTX-216ENST00000472896 COMMD2Q86X83 199 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 NECAP1Q8NC96 275 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 OR8B12Q8NGG6 310 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 OR5L1Q8NGL2 311 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 OR10S1Q8NGN2 331 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 OR2Y1Q8NGV0 311 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 CMTM2Q8TAZ6 248 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 C10orf35Q96D05 121 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 WDYHV1Q96HA8 205 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 WWTR1Q9GZV5 400 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 TMEM222Q9H0R3 208 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 ZNF665Q9H7R5 613 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 FAM60AQ9NP50 221 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 SERINC1Q9NRX5 453 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 SLC45A2Q9UMX9 530 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 CLDN16Q9Y5I7 305 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 TRAPPC1Q9Y5R8 145 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 PXMP4Q9Y6I8 212 aa8.62□□□□□ -1.03
APTX-216ENST00000472896 A0A0J9YY10 115 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 FRG2CA6NGY1 282 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 TGFBR3LH3BV60 316 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 MPPED1O15442 326 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 ONECUT2O95948 504 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 IGHEP01854 428 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 CLPSP04118 112 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 OMGP23515 440 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 HERV-K104P61576 105 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 RUNX1Q01196 453 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 UBE2V1Q13404 147 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 CDSNQ15517 529 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 OR8B8Q15620 311 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 PHLDA2Q53GA4 152 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 TMEM41BQ5BJD5 291 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 TPTE2P1Q5T6R2 138 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 SLC25A24Q6NUK1 477 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 ZNF695Q8IW36 515 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 ODF3L1Q8IXM7 274 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 GCNT2Q8N0V5 402 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 OR5D18Q8NGL1 313 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 PP6455Q8WZ26 134 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 IL22RA2Q969J5 263 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 ZNF524Q96C55 264 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 SDSLQ96GA7 329 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 TAAR6Q96RI8 345 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 LIME1Q9H400 295 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 KLHL13Q9P2N7 655 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 NXT1Q9UKK6 140 aaKnown RBP8.61□□□□□ -1.03
APTX-216ENST00000472896 WIPI2Q9Y4P8 454 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 IGKV1-9A0A0C4DH69 117 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 CCL21O00585 134 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 ZNF737O75373 536 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 NXPH2O95156 264 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 GRB2P62993 217 aaKnown RBP8.61□□□□□ -1.03
APTX-216ENST00000472896 MEF2BQ02080 365 aaPredicted RBP8.61□□□□□ -1.03
APTX-216ENST00000472896 Q0VFX4 171 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 EXT1Q16394 746 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 BATFQ16520 125 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 OR8G2PQ6IF36 304 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 MRPL14Q6P1L8 145 aaKnown RBP8.61□□□□□ -1.03
APTX-216ENST00000472896 POMZP3Q6PJE2 187 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 FAM180AQ6UWF9 173 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 CPEB2Q7Z5Q1 589 aaKnown RBP8.61□□□□□ -1.03
APTX-216ENST00000472896 ZNF808Q8N4W9 903 aaPredicted RBP8.61□□□□□ -1.03
APTX-216ENST00000472896 CORO2AQ92828 525 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 Q96M66 194 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 ADOQ96SZ5 270 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 ZNF286AQ9HBT8 521 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 RPRMQ9NS64 109 aa8.61□□□□□ -1.03
APTX-216ENST00000472896 TRGV8A0A0C4DH27 118 aa8.6□□□□□ -1.03
APTX-216ENST00000472896 MS4A18H0YCH9 400 aa8.6□□□□□ -1.03
APTX-216ENST00000472896 CST7O76096 145 aa8.6□□□□□ -1.03
APTX-216ENST00000472896 SLC25A6P12236 298 aa8.6□□□□□ -1.03
APTX-216ENST00000472896 ZNF17P17021 662 aa8.6□□□□□ -1.03
APTX-216ENST00000472896 AADACP22760 399 aa8.6□□□□□ -1.03
APTX-216ENST00000472896 MDH2P40926 338 aaKnown RBP8.6□□□□□ -1.03
APTX-216ENST00000472896 PSMB3P49720 205 aa8.6□□□□□ -1.03
APTX-216ENST00000472896 ZNF121P58317 390 aaPredicted RBP8.6□□□□□ -1.03
APTX-216ENST00000472896 FXYD4P59646 89 aa8.6□□□□□ -1.03
APTX-216ENST00000472896 FMODQ06828 376 aa8.6□□□□□ -1.03
APTX-216ENST00000472896 DEFB110Q30KQ9 67 aa8.6□□□□□ -1.03
APTX-216ENST00000472896 MS4A18Q3C1V0 323 aa8.6□□□□□ -1.03
APTX-216ENST00000472896 RHBDD2Q6NTF9 364 aa8.6□□□□□ -1.03
APTX-216ENST00000472896 LCN15Q6UWW0 184 aa8.6□□□□□ -1.03
APTX-216ENST00000472896 C6orf201Q7Z4U5 140 aa8.6□□□□□ -1.03
APTX-216ENST00000472896 SELENOHQ8IZQ5 122 aaKnown RBP8.6□□□□□ -1.03
APTX-216ENST00000472896 SHISA5Q8N114 240 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms