RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 DEFA3P59666 94 aa13.72□□□□□ -0.21
CCM2-205ENST00000472223 KLF9Q13886 244 aaPredicted RBP13.72□□□□□ -0.21
CCM2-205ENST00000472223 PLA1AQ53H76 456 aa13.72□□□□□ -0.21
CCM2-205ENST00000472223 HCP5Q6MZN7 132 aa13.72□□□□□ -0.21
CCM2-205ENST00000472223 CCDC144NLQ6NUI1 221 aa13.72□□□□□ -0.21
CCM2-205ENST00000472223 BRD3OSQ6XYD6 125 aa13.72□□□□□ -0.21
CCM2-205ENST00000472223 C1orf229Q6ZS94 237 aaPredicted RBP13.72□□□□□ -0.21
CCM2-205ENST00000472223 OR4C16Q8NGL9 310 aa13.72□□□□□ -0.21
CCM2-205ENST00000472223 MALSU1Q96EH3 234 aa13.72□□□□□ -0.21
CCM2-205ENST00000472223 SCGB3A2Q96PL1 93 aa13.72□□□□□ -0.21
CCM2-205ENST00000472223 SDHCQ99643 169 aaPredicted RBP13.72□□□□□ -0.21
CCM2-205ENST00000472223 GSX1Q9H4S2 264 aaPredicted RBP13.72□□□□□ -0.21
CCM2-205ENST00000472223 ODF3BA8MYP8 253 aa13.71□□□□□ -0.21
CCM2-205ENST00000472223 UPK1BO75841 260 aa13.71□□□□□ -0.21
CCM2-205ENST00000472223 GAPDHP04406 335 aaKnown RBP13.71□□□□□ -0.21
CCM2-205ENST00000472223 SAA4P35542 130 aa13.71□□□□□ -0.21
CCM2-205ENST00000472223 KLF17Q5JT82 389 aaPredicted RBP13.71□□□□□ -0.21
CCM2-205ENST00000472223 MZT2BQ6NZ67 158 aa13.71□□□□□ -0.21
CCM2-205ENST00000472223 Q71RC1 249 aaPredicted RBP13.71□□□□□ -0.21
CCM2-205ENST00000472223 ZNF439Q8NDP4 499 aa13.71□□□□□ -0.21
CCM2-205ENST00000472223 OR56B4Q8NH76 319 aa13.71□□□□□ -0.21
CCM2-205ENST00000472223 SECTM1Q8WVN6 248 aa13.71□□□□□ -0.21
CCM2-205ENST00000472223 TOMM40LQ969M1 308 aa13.71□□□□□ -0.21
CCM2-205ENST00000472223 SLC5A7Q9GZV3 580 aa13.71□□□□□ -0.21
CCM2-205ENST00000472223 OR2D2Q9H210 308 aa13.71□□□□□ -0.21
CCM2-205ENST00000472223 HRASLSQ9HDD0 168 aa13.71□□□□□ -0.21
CCM2-205ENST00000472223 RNF150Q9ULK6 438 aa13.71□□□□□ -0.21
CCM2-205ENST00000472223 OOSP1A8MZH6 123 aa13.7□□□□□ -0.22
CCM2-205ENST00000472223 TXNL1O43396 289 aa13.7□□□□□ -0.22
CCM2-205ENST00000472223 TUSC2O75896 110 aa13.7□□□□□ -0.22
CCM2-205ENST00000472223 FBP1P09467 338 aa13.7□□□□□ -0.22
CCM2-205ENST00000472223 PGAM2P15259 253 aa13.7□□□□□ -0.22
CCM2-205ENST00000472223 SRD5A1P18405 259 aa13.7□□□□□ -0.22
CCM2-205ENST00000472223 ZNF134P52741 427 aa13.7□□□□□ -0.22
CCM2-205ENST00000472223 RUSC1-AS1Q66K80 236 aa13.7□□□□□ -0.22
CCM2-205ENST00000472223 FAM53AQ6NSI3 398 aaPredicted RBP13.7□□□□□ -0.22
CCM2-205ENST00000472223 RBMS3Q6XE24 437 aaKnown RBP13.7□□□□□ -0.22
CCM2-205ENST00000472223 IL17RELQ6ZVW7 336 aa13.7□□□□□ -0.22
CCM2-205ENST00000472223 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.7□□□□□ -0.22
CCM2-205ENST00000472223 OR4P4Q8NGL7 312 aa13.7□□□□□ -0.22
CCM2-205ENST00000472223 TERB2Q8NHR7 220 aa13.7□□□□□ -0.22
CCM2-205ENST00000472223 ZDHHC16Q969W1 377 aa13.7□□□□□ -0.22
CCM2-205ENST00000472223 SLC6A7Q99884 636 aa13.7□□□□□ -0.22
CCM2-205ENST00000472223 ZNF469Q96JG9 3925 aaPredicted RBP13.7□□□□□ -0.22
CCM2-205ENST00000472223 HIVEP1P15822 2718 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 SLC31A2O15432 143 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 SSX2Q16385 188 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 FAM71F2Q6NXP2 309 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 IDO2Q6ZQW0 420 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 TGIF2LXQ8IUE1 241 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 CMTM1Q8IZ96 169 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 ZNF645Q8N7E2 425 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 ZBTB34Q8NCN2 500 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 OR4D10Q8NGI6 311 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 OR51S1Q8NGJ8 323 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 ZFAND1Q8TCF1 268 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 MOB3AQ96BX8 217 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 ABHD14BQ96IU4 210 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 GAB2Q9UQC2 676 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 HILPDAQ9Y5L2 63 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 HIVEP2P31629 2446 aa13.69□□□□□ -0.22
CCM2-205ENST00000472223 HSD17B6O14756 317 aa13.68□□□□□ -0.22
CCM2-205ENST00000472223 FSHBP01225 129 aa13.68□□□□□ -0.22
CCM2-205ENST00000472223 BRS3P32247 399 aa13.68□□□□□ -0.22
CCM2-205ENST00000472223 ABCA11PQ4W5N1 156 aa13.68□□□□□ -0.22
CCM2-205ENST00000472223 TPTE2P1Q5T6R2 138 aa13.68□□□□□ -0.22
CCM2-205ENST00000472223 FAAP20Q6NZ36 180 aa13.68□□□□□ -0.22
CCM2-205ENST00000472223 C9orf139Q6ZV77 190 aa13.68□□□□□ -0.22
CCM2-205ENST00000472223 SLC38A6Q8IZM9 456 aa13.68□□□□□ -0.22
CCM2-205ENST00000472223 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
CCM2-205ENST00000472223 AKR1E2Q96JD6 320 aa13.68□□□□□ -0.22
CCM2-205ENST00000472223 AGMATQ9BSE5 352 aa13.68□□□□□ -0.22
CCM2-205ENST00000472223 PARP12Q9H0J9 701 aaKnown RBP13.68□□□□□ -0.22
CCM2-205ENST00000472223 IFI27L2Q9H2X8 130 aa13.68□□□□□ -0.22
CCM2-205ENST00000472223 SLC2A8Q9NY64 477 aa13.68□□□□□ -0.22
CCM2-205ENST00000472223 TLN2Q9Y4G6 2542 aa13.68□□□□□ -0.22
CCM2-205ENST00000472223 SAA2-SAA4A0A096LPE2 208 aa13.67□□□□□ -0.22
CCM2-205ENST00000472223 INAFM1C9JVW0 142 aa13.67□□□□□ -0.22
CCM2-205ENST00000472223 LYRM1O43325 122 aa13.67□□□□□ -0.22
CCM2-205ENST00000472223 SAA2P0DJI9 122 aaPredicted RBP13.67□□□□□ -0.22
CCM2-205ENST00000472223 UCP3P55916 312 aa13.67□□□□□ -0.22
CCM2-205ENST00000472223 MSMO1Q15800 293 aa13.67□□□□□ -0.22
CCM2-205ENST00000472223 UTF1Q5T230 341 aa13.67□□□□□ -0.22
CCM2-205ENST00000472223 ZNF660Q6AZW8 331 aaPredicted RBP13.67□□□□□ -0.22
CCM2-205ENST00000472223 LHFPL4Q7Z7J7 247 aa13.67□□□□□ -0.22
CCM2-205ENST00000472223 MOB3BQ86TA1 216 aa13.67□□□□□ -0.22
CCM2-205ENST00000472223 OR8H3Q8N146 312 aa13.67□□□□□ -0.22
CCM2-205ENST00000472223 SLC25A21Q9BQT8 299 aaPredicted RBP13.67□□□□□ -0.22
CCM2-205ENST00000472223 ZNRD1Q9P1U0 126 aa13.67□□□□□ -0.22
CCM2-205ENST00000472223 C14orf166Q9Y224 244 aaKnown RBP13.67□□□□□ -0.22
CCM2-205ENST00000472223 MAST4O15021 2626 aa13.66□□□□□ -0.22
CCM2-205ENST00000472223 A0A0U1RQK1 487 aa13.66□□□□□ -0.22
CCM2-205ENST00000472223 BTBD17A6NE02 478 aa13.66□□□□□ -0.22
CCM2-205ENST00000472223 OR5H14A6NHG9 310 aa13.66□□□□□ -0.22
CCM2-205ENST00000472223 RNF212BA8MTL3 300 aa13.66□□□□□ -0.22
CCM2-205ENST00000472223 M0R1X1 148 aa13.66□□□□□ -0.22
CCM2-205ENST00000472223 ZNF137PP52743 207 aa13.66□□□□□ -0.22
CCM2-205ENST00000472223 CBX3Q13185 183 aa13.66□□□□□ -0.22
CCM2-205ENST00000472223 SURF2Q15527 256 aaPredicted RBP13.66□□□□□ -0.22
CCM2-205ENST00000472223 RTN4IP1Q8WWV3 396 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms