RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ST3GAL2Q16842 350 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ZNF488Q96MN9 340 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PPIAL4AQ9Y536 164 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 HRKO00198 91 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 REG1AP05451 166 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 HLA-DRB5Q30154 266 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CCDC144NLQ6NUI1 221 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 OR1L8Q8NGR8 309 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 MARVELD3Q96A59 401 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 OPN3Q9H1Y3 402 aaPredicted RBP11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SIRT7Q9NRC8 400 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 GLRX2Q9NS18 164 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CISD1Q9NZ45 108 aaKnown RBP11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 OR51B2Q9Y5P1 312 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PRR35P0CG20 571 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 DAOP14920 347 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 COL13A1Q5TAT6 717 aaPredicted RBP11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 WBP1LQ9NX94 342 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PLXNB1O43157 2135 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 TMEM33P57088 247 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 MRPL58Q14197 206 aaKnown RBP11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ZNF658BQ4V348 819 aaPredicted RBP11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 VN1R17PQ8TDU5 208 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SEPSECSQ9HD40 501 aaKnown RBP11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CCL28Q9NRJ3 127 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 COLQQ9Y215 455 aaPredicted RBP11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 GP1BAP07359 652 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 FABP2P12104 132 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SNRPD3P62318 126 aaKnown RBP11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ZDHHC22Q8N966 263 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ITLN2Q8WWU7 325 aaPredicted RBP11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 RAB33BQ9H082 229 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 MPC1Q9Y5U8 109 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PGPA6NDG6 321 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 FCARP24071 287 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 FCGR2BP31994 310 aaPredicted RBP11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 TMEM255AQ5JRV8 349 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 DPPA3Q6W0C5 159 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 FAM216AQ8WUB2 273 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SNURFLB1AK76 121 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SYNGR1O43759 233 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SNRPEP62304 92 aaKnown RBP11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 GPBAR1Q8TDU6 330 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ASB10Q8WXI3 467 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ABHD14BQ96IU4 210 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 IGKV3D-20A0A0C4DH25 116 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 DUXBA0A1W2PPF3 345 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CGB7P0DN87 165 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PLP1P60201 277 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 GTSCR1Q86UQ5 136 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 OR2V2Q96R30 315 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 FGF20Q9NP95 211 aaPredicted RBP11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 TMEFF2Q9UIK5 374 aaPredicted RBP11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SF3B6Q9Y3B4 125 aaKnown RBP11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 LINC00862A6NCI5 91 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ACVR1Q04771 509 aa11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CXorf66Q5JRM2 361 aaPredicted RBP11.57□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SFT2D2O95562 160 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 WNT5BQ9H1J7 359 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 IL20Q9NYY1 176 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 APCSP02743 223 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PRDX2P32119 198 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 FOXB2Q5VYV0 432 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 FAM169BQ8N8A8 192 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ZFP30Q9Y2G7 519 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 RBFOX3A6NFN3 312 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PAGE4O60829 102 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PITX3O75364 302 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CLEC18BQ6UXF7 455 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 FUT9Q9Y231 359 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 STARD10Q9Y365 291 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 IGHV3OR16-13A0A075B7E8 117 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 IGHV3-49A0A0A0MS15 119 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 IGHV3-74A0A0B4J1X5 117 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 NKX2-8O15522 239 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ZIC3O60481 467 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 MPC2O95563 127 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SAA1P0DJI8 122 aaPredicted RBP11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ERVFRD-1P60508 538 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 KLF9Q13886 244 aaPredicted RBP11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 HIGD1AQ9Y241 93 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 DOCK1Q14185 1865 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 THY1P04216 161 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 GZMHP20718 246 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SIGLEC14Q08ET2 396 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SLC35E3Q7Z769 313 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 FDCSPQ8NFU4 85 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 MS4A3Q96HJ5 214 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SPOCK3Q9BQ16 436 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 METTL1Q9UBP6 276 aaKnown RBP11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 RAE1P78406 368 aaKnown RBP11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 OR6X1Q8NH79 312 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 RNF122Q9H9V4 155 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 TMEM56-RWDD3S4R434 201 aa11.56□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 A0A1B0GV72 72 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SMIM6P0DI80 62 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CNTFRP26992 372 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SLC25A1P53007 311 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 TGIF1Q15583 401 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 KHDC3LQ587J8 217 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms