RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 IFITM3Q01628 133 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 MEF2DQ14814 521 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 OR52W1Q6IF63 320 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 STEAP1BQ6NZ63 245 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 NDUFA11Q86Y39 141 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 FAM185AQ8N0U4 392 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 C11orf42Q8N5U0 333 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 TPRX1Q8N7U7 411 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 ZNF565Q8N9K5 539 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 OR4F17Q8NGA8 305 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 OR4A4PQ8NGN8 299 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 OR5H2Q8NGV7 314 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 CCDC107Q8WV48 283 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 CORO2AQ92828 525 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 OR4F4Q96R69 305 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 MMP28Q9H239 520 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 HEXA-AS1Q9H8Q6 139 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 C19orf12Q9NSK7 152 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 ING3Q9NXR8 418 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 UBE2J1Q9Y385 318 aaPredicted RBP7.3□□□□□ -1.24
SF3A1-206ENST00000471037 LINC00312Q9Y6C7 94 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 NAP1L6A6NFF2 107 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 ZNF729A6NN14 1252 aaPredicted RBP7.29□□□□□ -1.24
SF3A1-206ENST00000471037 CENPXA8MT69 81 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 FABP7O15540 132 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 RAB3DO95716 219 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 CD3DP04234 171 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 FCER2P06734 321 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 CD28P10747 220 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 PAX6P26367 422 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 HLA-DMAP28067 261 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 HRH1P35367 487 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 OR3A3P47888 321 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 ASAH1Q13510 395 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 CDK10Q15131 360 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 HMGN3Q15651 99 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 NSUN5P1Q3KNT7 163 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 TMEM30BQ3MIR4 351 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 RNASE10Q5GAN6 216 aaKnown RBP7.29□□□□□ -1.24
SF3A1-206ENST00000471037 VAX1Q5SQQ9 334 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 LYG1Q8N1E2 194 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 OR5AP2Q8NGF4 316 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 OR13A1Q8NGR1 328 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 MRGPRDQ8TDS7 321 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 MAFIPQ8WZ33 124 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 R3HDM4Q96D70 268 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 CABLES2Q9BTV7 478 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 WNT10AQ9GZT5 417 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 GAL3ST2Q9H3Q3 398 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 TAF9BQ9HBM6 251 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 TAS2R3Q9NYW6 316 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 TCF19Q9Y242 345 aa7.29□□□□□ -1.24
SF3A1-206ENST00000471037 NOTCH3Q9UM47 2321 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 IGKV1D-8A0A087WSZ0 117 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 TRAV39A0A0B4J263 110 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 KBTBD11-OT1A0A1B0GTJ5 212 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 LINC00854A0A1B0GVQ3 168 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 hCG_1809904A0A1W2PP81 198 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 A0A1W2PPE2 198 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 A0A1W2PR64 198 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 A0A1W2PRV1 198 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 DISC1C4P0D8 188 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 C12orf77C9JDV5 145 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 PLA2G10O15496 165 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 SPINT2O43291 252 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 LYRM1O43325 122 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 IFNA6P05013 189 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 SCTP09683 121 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 GSTT2P0CG29 244 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 LGALS4P56470 323 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 ERVFRD-1P60508 538 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 HABP2Q14520 560 aaPredicted RBP7.28□□□□□ -1.24
SF3A1-206ENST00000471037 TMEM200BQ69YZ2 307 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 MZT2BQ6NZ67 158 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 CCBE1Q6UXH8 406 aaPredicted RBP7.28□□□□□ -1.24
SF3A1-206ENST00000471037 TCF23Q7RTU1 214 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 OVCH2Q7RTZ1 564 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 TMEM17Q86X19 198 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 ARRDC1Q8N5I2 433 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 WFDC9Q8NEX5 89 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 OR4C16Q8NGL9 310 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 ARL11Q969Q4 196 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 GALMQ96C23 342 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 ZNF714Q96N38 554 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 CITED2Q99967 270 aaPredicted RBP7.28□□□□□ -1.24
SF3A1-206ENST00000471037 LINC00574Q9H8X3 128 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 HRASLSQ9HDD0 168 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 SLC2A8Q9NY64 477 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 CALYQ9NYX4 217 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 PITPNC1Q9UKF7 332 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 TBC1D24Q9ULP9 559 aa7.28□□□□□ -1.24
SF3A1-206ENST00000471037 TBL2Q9Y4P3 447 aaKnown RBP7.28□□□□□ -1.24
SF3A1-206ENST00000471037 NBEAL2Q6ZNJ1 2754 aa7.27□□□□□ -1.25
SF3A1-206ENST00000471037 A6NDX4 124 aa7.27□□□□□ -1.25
SF3A1-206ENST00000471037 ODF3BA8MYP8 253 aa7.27□□□□□ -1.25
SF3A1-206ENST00000471037 NPIPB11E5RHQ5 1161 aa7.27□□□□□ -1.25
SF3A1-206ENST00000471037 C15orf65H3BRN8 121 aa7.27□□□□□ -1.25
SF3A1-206ENST00000471037 M0QYG6 137 aa7.27□□□□□ -1.25
SF3A1-206ENST00000471037 F2RL2O00254 374 aa7.27□□□□□ -1.25
SF3A1-206ENST00000471037 HBZP02008 142 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms