RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 LY6G6FQ5SQ64 297 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 SLC25A30Q5SVS4 291 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 LPCAT4Q643R3 524 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 FAM71F2Q6NXP2 309 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 UNQ5815/PRO19632Q6UWF5 114 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 ZNF562Q6V9R5 426 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 OR2AK2Q8NG84 335 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 OR10V1Q8NGI7 309 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 OR10K1Q8NGX5 313 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 GPR148Q8TDV2 347 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 RGP1Q92546 391 aaPredicted RBP6.75□□□□□ -1.33
XRN1-208ENST00000470537 GALMQ96C23 342 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 TMEM68Q96MH6 324 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 HIPK2Q9H2X6 1198 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 ZNF355PQ9NSJ1 428 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 ETAA1Q9NY74 926 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 PIPOXQ9P0Z9 390 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 PEMTQ9UBM1 199 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 STEAP1Q9UHE8 339 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 JPT1Q9UK76 154 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 A3GALT2U3KPV4 340 aa6.75□□□□□ -1.33
XRN1-208ENST00000470537 OR5H14A6NHG9 310 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 RAB29O14966 203 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 SLC31A2O15432 143 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 GYG2O15488 501 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 AIREO43918 545 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 SOX15O60248 233 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 YPEL1O60688 119 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 MITFO75030 526 aaPredicted RBP6.74□□□□□ -1.33
XRN1-208ENST00000470537 FADS2O95864 444 aaKnown RBP6.74□□□□□ -1.33
XRN1-208ENST00000470537 FCGR1AP12314 374 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 SERPINA2P20848 420 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 KLF5Q13887 457 aaPredicted RBP6.74□□□□□ -1.33
XRN1-208ENST00000470537 ATP6AP1Q15904 470 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 LRRC36Q1X8D7 754 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 C19orf54Q5BKX5 351 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 C6orf141Q5SZD1 244 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 ZNF529Q6P280 563 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 SYT8Q8NBV8 401 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 LFNGQ8NES3 379 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 UBALD1Q8TB05 177 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 LINC00476Q8WZB0 136 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 TMEM106AQ96A25 262 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 MS4A10Q96PG2 267 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 YPEL2Q96QA6 119 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 CIB1Q99828 191 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 NABP2Q9BQ15 211 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 TAF9BQ9HBM6 251 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 ABRACLQ9P1F3 81 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 RCC2Q9P258 522 aaKnown RBP6.74□□□□□ -1.33
XRN1-208ENST00000470537 CKLFQ9UBR5 152 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 ORC6Q9Y5N6 252 aa6.74□□□□□ -1.33
XRN1-208ENST00000470537 A0A0B4J203 849 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 NUPR2A6NF83 97 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 FAM90A7PA6NKC0 464 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 FAM90A23PA8MXZ1 464 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 H7C2Y5 167 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 J3QRE1 110 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 BDKRB2P30411 391 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 GYS2P54840 703 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 SLC22A6Q4U2R8 563 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 DDI2Q5TDH0 399 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 RAB12Q6IQ22 244 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 ZNF833PQ6ZTB9 187 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 OR4K15Q8NH41 348 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 SNAPC3Q92966 411 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 USMG5Q96IX5 58 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 Q96MT0 163 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 RDH12Q96NR8 316 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 TSNAXQ99598 290 aaKnown RBP6.73□□□□□ -1.33
XRN1-208ENST00000470537 PDCD1LG2Q9BQ51 273 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 ST6GALNAC5Q9BVH7 336 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 GABARAPL3Q9BY60 117 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 MRPL20Q9BYC9 149 aaKnown RBP6.73□□□□□ -1.33
XRN1-208ENST00000470537 GABARAPL1Q9H0R8 117 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 FBXL15Q9H469 300 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 ZNF446Q9NWS9 450 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 PEF1Q9UBV8 284 aaKnown RBP6.73□□□□□ -1.33
XRN1-208ENST00000470537 POMPQ9Y244 141 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 PEX16Q9Y5Y5 336 aa6.73□□□□□ -1.33
XRN1-208ENST00000470537 STARD9Q9P2P6 4700 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 CXorf65A6NEN9 183 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 ATP8B1O43520 1251 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 GPX5O75715 221 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 OR2A4O95047 310 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 MAS1P04201 325 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 RCC1P18754 421 aaPredicted RBP6.72□□□□□ -1.33
XRN1-208ENST00000470537 FUT3P21217 361 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 CAPGP40121 348 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 MAP2K4P45985 399 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 LGALS7P47929 136 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 SYNJ2BPP57105 145 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 CD81P60033 236 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 SNRPGP62308 76 aaKnown RBP6.72□□□□□ -1.33
XRN1-208ENST00000470537 GNGT1P63211 74 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 RPEL1Q2QD12 228 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 CCDC58Q4VC31 144 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 FAM209BQ5JX69 171 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 LINC00322Q6ZN03 302 aaPredicted RBP6.72□□□□□ -1.33
XRN1-208ENST00000470537 LHFPL3Q86UP9 236 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms