RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 PLSCR4Q9NRQ2 329 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.73□□□□□ -1.33
SMC4-212ENST00000470240 TINAGQ9UJW2 476 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 POLR3KQ9Y2Y1 108 aaPredicted RBP6.73□□□□□ -1.33
SMC4-212ENST00000470240 RNF115Q9Y4L5 304 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 ZNF407Q9C0G0 2248 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 ZDBF2Q9HCK1 2354 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 TRAV1-1A0A0B4J248 108 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 SPAARA0A1B0GVQ0 90 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 OR5H1A6NKK0 313 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 B4DEV8 164 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 SOX15O60248 233 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 C1QL1O75973 258 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 IFNA17P01571 189 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 HBZP02008 142 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 CRYABP02511 175 aaKnown RBP6.72□□□□□ -1.33
SMC4-212ENST00000470240 S100A9P06702 114 aaKnown RBP6.72□□□□□ -1.33
SMC4-212ENST00000470240 CECR9P0C854 216 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 OR13C7P0DN81 318 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 MPV17P39210 176 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 KIR2DL2P43627 348 aaPredicted RBP6.72□□□□□ -1.33
SMC4-212ENST00000470240 HOXA1P49639 335 aaPredicted RBP6.72□□□□□ -1.33
SMC4-212ENST00000470240 FHITP49789 147 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 UBE2KP61086 200 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 ERVK-16P61578 105 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 SLC38A11Q08AI6 406 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 TMEM41BQ5BJD5 291 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 ZNF506Q5JVG8 444 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 SPANXN5Q5MJ07 72 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 RBMS3Q6XE24 437 aaKnown RBP6.72□□□□□ -1.33
SMC4-212ENST00000470240 H2BFWTQ7Z2G1 175 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 WDR86Q86TI4 376 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 ZNF709Q8N972 641 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 WDR31Q8NA23 367 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 C9orf106Q8NAJ2 232 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 LRRC29Q8WV35 223 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 TMEM171Q8WVE6 324 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 MUCL1Q96DR8 90 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 GPHA2Q96T91 129 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 TCEAL7Q9BRU2 100 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 HIPK2Q9H2X6 1198 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 ASCL3Q9NQ33 180 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 TIMM9Q9Y5J7 89 aa6.72□□□□□ -1.33
SMC4-212ENST00000470240 PUS1Q9Y606 427 aaKnown RBP eCLIP6.72□□□□□ -1.33
SMC4-212ENST00000470240 SHANK1Q9Y566 2161 aa6.71□□□□□ -1.33
SMC4-212ENST00000470240 KRTAP9-6A0A140TA67 174 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 C12orf77C9JDV5 145 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 C17orf112F2Z3M2 114 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 H3BP45 60 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 RAB29O14966 203 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 AGFG2O95081 481 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 OR2C1O95371 312 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 CLDN14O95500 239 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 IGLV1-44P01699 117 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 CRYAAP02489 173 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 CRYBA1P05813 215 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 METTL15P1P0C7V9 234 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 GZMHP20718 246 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 NFYBP25208 207 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 KIR2DS2P43631 304 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 GPR12P47775 334 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 FABP6P51161 128 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 CEBPGP53567 150 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 COL10A1Q03692 680 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 PNRC1Q12796 327 aaPredicted RBP6.71□□□□□ -1.34
SMC4-212ENST00000470240 HAGHQ16775 308 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 C3orf36Q3SXR2 165 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 VWA1Q6PCB0 445 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 FAM180AQ6UWF9 173 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 WDR82Q6UXN9 313 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 FGFRL1Q8N441 504 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 ZNF808Q8N4W9 903 aaPredicted RBP6.71□□□□□ -1.34
SMC4-212ENST00000470240 ZNF525Q8N782 197 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 OR10P1Q8NGE3 313 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 OR10G4Q8NGN3 311 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 OR1L1Q8NH94 360 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 MRGPRDQ8TDS7 321 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 P2RX4Q99571 388 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 TMEM147Q9BVK8 224 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 TOLLIPQ9H0E2 274 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 SEBOXQ9HB31 216 aaPredicted RBP6.71□□□□□ -1.34
SMC4-212ENST00000470240 SIRT7Q9NRC8 400 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 UFSP2Q9NUQ7 469 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 GNG12Q9UBI6 72 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 ESPL1Q14674 2120 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 MED12LQ86YW9 2145 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 MED13Q9UHV7 2174 aa6.71□□□□□ -1.34
SMC4-212ENST00000470240 AHCTF1Q8WYP5 2266 aa6.7□□□□□ -1.34
SMC4-212ENST00000470240 A0A087WWC5 75 aa6.7□□□□□ -1.34
SMC4-212ENST00000470240 TRAV39A0A0B4J263 110 aa6.7□□□□□ -1.34
SMC4-212ENST00000470240 IGHV2OR16-5A0A0B4J2B6 119 aa6.7□□□□□ -1.34
SMC4-212ENST00000470240 UBE2L5PA0A1B0GUS4 154 aa6.7□□□□□ -1.34
SMC4-212ENST00000470240 LOC102723971A0A1B0GUV8 181 aa6.7□□□□□ -1.34
SMC4-212ENST00000470240 MBD3L4A6NDZ8 208 aaPredicted RBP6.7□□□□□ -1.34
SMC4-212ENST00000470240 MBD3L3A6NE82 208 aaPredicted RBP6.7□□□□□ -1.34
SMC4-212ENST00000470240 CXorf65A6NEN9 183 aa6.7□□□□□ -1.34
SMC4-212ENST00000470240 MBD3L5A6NJ08 208 aaPredicted RBP6.7□□□□□ -1.34
SMC4-212ENST00000470240 COLCA2A8K830 154 aa6.7□□□□□ -1.34
SMC4-212ENST00000470240 CEBPZOSA8MTT3 80 aa6.7□□□□□ -1.34
SMC4-212ENST00000470240 C9JQL5 133 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms