RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 FAM3BP58499 235 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-205ENST00000469550 COL10A1Q03692 680 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 USF2Q15853 346 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-205ENST00000469550 MPV17LQ2QL34 196 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 KRTAP27-1Q3LI81 207 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 SCGB1C1Q8TD33 95 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 THAP3Q8WTV1 239 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-205ENST00000469550 ITLN2Q8WWU7 325 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-205ENST00000469550 PINX1Q96BK5 328 aaKnown RBP8.15□□□□□ -1.1
HDAC3-205ENST00000469550 ADGRG7Q96K78 797 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 HIST1H2AAQ96QV6 131 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 ZNF442Q9H7R0 627 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 CENPEQ02224 2701 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 ZFP92A6NM28 416 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 KIAA1324LA8MWY0 1029 aaPredicted RBP8.15□□□□□ -1.11
HDAC3-205ENST00000469550 SYNGR3O43761 229 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 IL18BPO95998 194 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 CRYABP02511 175 aaKnown RBP8.15□□□□□ -1.11
HDAC3-205ENST00000469550 ZNF880Q6PDB4 577 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 BRICD5Q6PL45 260 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 ZNF818PQ6ZRF7 136 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 GAPTQ8N292 157 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 ZNF808Q8N4W9 903 aaPredicted RBP8.15□□□□□ -1.11
HDAC3-205ENST00000469550 OR10G3Q8NGC4 313 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 OR51G1Q8NGK1 321 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 TMEM170AQ8WVE7 144 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 ZNF665Q9H7R5 613 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 Q9N2K0 584 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 TAAR3PQ9P1P4 343 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 MYOTQ9UBF9 498 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 OR14J1Q9UGF5 321 aa8.15□□□□□ -1.11
HDAC3-205ENST00000469550 NCOA6Q14686 2063 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-205ENST00000469550 SVILO95425 2214 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 XKRY2A2RUG3 117 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 SLC22A20A6NK97 555 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 PPP5D1E7EU14 171 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 NAPSAO96009 420 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 TYMSP04818 313 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 CST2P09228 141 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 CA7P43166 264 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 CLDN15P56746 228 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 ZNF726P1Q15940 193 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 TMEM241Q24JQ0 296 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 ACOT6Q3I5F7 207 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-205ENST00000469550 SPIN3Q5JUX0 258 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 NCR3LG1Q68D85 454 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 SLC25A24Q6NUK1 477 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 OR1F12Q8NHA8 337 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 TMEM18Q96B42 140 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 RBM24Q9BX46 236 aaKnown RBP8.14□□□□□ -1.11
HDAC3-205ENST00000469550 PLA2G3Q9NZ20 509 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 PRSS50Q9UI38 385 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 MYO7BQ6PIF6 2116 aa8.14□□□□□ -1.11
HDAC3-205ENST00000469550 KIR2DS1A0A191URI9 304 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 TMEM250H0YL14 139 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 KBTBD11O94819 623 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 CNOT4O95628 575 aaKnown RBP8.13□□□□□ -1.11
HDAC3-205ENST00000469550 CELA2AP08217 269 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 RAB4AP20338 218 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 KIR2DS4P43632 304 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 TNFRSF9Q07011 255 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 PRDX4Q13162 271 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 KIR2DS1Q14954 304 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 DAZAP2Q15038 168 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-205ENST00000469550 IQCJQ1A5X6 159 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 LRRC75BQ2VPJ9 315 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 TMEM41BQ5BJD5 291 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 CRYBG3Q68DQ2 2970 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 GFRALQ6UXV0 394 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 MRPL52Q86TS9 123 aaKnown RBP8.13□□□□□ -1.11
HDAC3-205ENST00000469550 ZNF295-AS1Q8N0V1 137 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 GPR137CQ8N3F9 429 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 OR2AE1Q8NHA4 323 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 ZNF385AQ96PM9 386 aaKnown RBP8.13□□□□□ -1.11
HDAC3-205ENST00000469550 OR5B12Q96R08 314 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 ULBP2Q9BZM5 246 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 LRBAP50851 2863 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 hCG_38984A0A1B0GV85 526 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 OR6C6A6NF89 314 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 CEBPZOSA8MTT3 80 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 NPIPA2E9PIF3 369 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 NPIPA3F8WFD2 350 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 CYTIPO60759 359 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 PGLYRP1O75594 196 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-205ENST00000469550 SNRPCP09234 159 aaKnown RBP8.13□□□□□ -1.11
HDAC3-205ENST00000469550 METTL15P1P0C7V9 234 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 S100GP29377 79 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 MDH2P40926 338 aaKnown RBP8.13□□□□□ -1.11
HDAC3-205ENST00000469550 RBPJQ06330 500 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 BSXQ3C1V8 233 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 ABHD17BQ5VST6 288 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 LCN15Q6UWW0 184 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 C16orf82Q7Z2V1 217 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 MCEMP1Q8IX19 187 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 ZNF525Q8N782 197 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 ANAPC16Q96DE5 110 aa8.13□□□□□ -1.11
HDAC3-205ENST00000469550 SPACA9Q96E40 222 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-205ENST00000469550 C19orf25Q9UFG5 118 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-205ENST00000469550 ZNF816-ZNF321PA0A0X1KG74 233 aa8.12□□□□□ -1.11
HDAC3-205ENST00000469550 ZNF705GA8MUZ8 300 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms