RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 OPN1MW3P0DN78 364 aa12.98□□□□□ -0.33
LIMS2-213ENST00000469300 APOBEC3AP31941 199 aaPredicted RBP12.98□□□□□ -0.33
LIMS2-213ENST00000469300 TMEM33P57088 247 aa12.98□□□□□ -0.33
LIMS2-213ENST00000469300 ATP5SQ99766 215 aa12.98□□□□□ -0.33
LIMS2-213ENST00000469300 MTCL1Q9Y4B5 1905 aaKnown RBP12.98□□□□□ -0.33
LIMS2-213ENST00000469300 TCF21O43680 179 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 S100A4P26447 101 aaKnown RBP12.97□□□□□ -0.33
LIMS2-213ENST00000469300 ZNF260Q3ZCT1 412 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 Q8WTZ3 238 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 ZNRF4Q8WWF5 429 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 KLF7O75840 302 aaPredicted RBP12.97□□□□□ -0.33
LIMS2-213ENST00000469300 SUCLG1P53597 346 aaKnown RBP12.97□□□□□ -0.33
LIMS2-213ENST00000469300 IFITM2Q01629 132 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 MUC15Q8N387 334 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 STXBP6Q8NFX7 210 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 MRGPRFQ96AM1 343 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 TECRQ9NZ01 308 aaKnown RBP12.97□□□□□ -0.33
LIMS2-213ENST00000469300 ANKRD36A6QL64 1941 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 C19orf67A6NJJ6 358 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 FAM87AP0C7U9 286 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 Q6ZN92 141 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 OR10G4Q8NGN3 311 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 OR10G9Q8NGN4 311 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 OR10G7Q8NGN6 311 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 ISOC2Q96AB3 205 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 KCNK7Q9Y2U2 307 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 NPY1RP25929 384 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 SULT1A1P50225 295 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 PDLIM4P50479 330 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 ACSF3Q4G176 576 aaPredicted RBP12.97□□□□□ -0.33
LIMS2-213ENST00000469300 ZNF552Q9H707 407 aaPredicted RBP12.97□□□□□ -0.33
LIMS2-213ENST00000469300 SEMA5BQ9P283 1151 aa12.97□□□□□ -0.33
LIMS2-213ENST00000469300 TRAV39A0A0B4J263 110 aa12.96□□□□□ -0.33
LIMS2-213ENST00000469300 DBX1A6NMT0 343 aa12.96□□□□□ -0.33
LIMS2-213ENST00000469300 ARG1P05089 322 aa12.96□□□□□ -0.33
LIMS2-213ENST00000469300 CELA3AP09093 270 aa12.96□□□□□ -0.33
LIMS2-213ENST00000469300 CXCL3P19876 107 aa12.96□□□□□ -0.33
LIMS2-213ENST00000469300 DLL3Q9NYJ7 618 aa12.96□□□□□ -0.33
LIMS2-213ENST00000469300 RPL24P83731 157 aaKnown RBP12.96□□□□□ -0.33
LIMS2-213ENST00000469300 PNRC1Q12796 327 aaPredicted RBP12.96□□□□□ -0.33
LIMS2-213ENST00000469300 COL5A1-AS1Q5SY13 56 aa12.96□□□□□ -0.33
LIMS2-213ENST00000469300 LPAR2Q9HBW0 351 aa12.96□□□□□ -0.33
LIMS2-213ENST00000469300 ZNF207O43670 478 aaKnown RBP12.96□□□□□ -0.33
LIMS2-213ENST00000469300 THY1P04216 161 aa12.96□□□□□ -0.33
LIMS2-213ENST00000469300 MUC1P15941 1255 aaPredicted RBP12.96□□□□□ -0.33
LIMS2-213ENST00000469300 PMCHP20382 165 aa12.96□□□□□ -0.33
LIMS2-213ENST00000469300 ZNF362Q5T0B9 420 aaPredicted RBP12.96□□□□□ -0.33
LIMS2-213ENST00000469300 OR10A7Q8NGE5 316 aa12.96□□□□□ -0.33
LIMS2-213ENST00000469300 MRPL24Q96A35 216 aaKnown RBP12.96□□□□□ -0.33
LIMS2-213ENST00000469300 PITPNC1Q9UKF7 332 aa12.96□□□□□ -0.33
LIMS2-213ENST00000469300 ZNF646O15015 1829 aaPredicted RBP12.96□□□□□ -0.34
LIMS2-213ENST00000469300 DNASE2O00115 360 aaPredicted RBP12.96□□□□□ -0.34
LIMS2-213ENST00000469300 HLA-DQB1P01920 261 aa12.96□□□□□ -0.34
LIMS2-213ENST00000469300 FAM106CPP0CH98 169 aa12.96□□□□□ -0.34
LIMS2-213ENST00000469300 SULT1A2P50226 295 aa12.96□□□□□ -0.34
LIMS2-213ENST00000469300 ZNF154Q13106 437 aa12.96□□□□□ -0.34
LIMS2-213ENST00000469300 PLAC9Q5JTB6 97 aa12.96□□□□□ -0.34
LIMS2-213ENST00000469300 ZNF600Q6ZNG1 722 aa12.96□□□□□ -0.34
LIMS2-213ENST00000469300 OPN4Q9UHM6 478 aa12.96□□□□□ -0.34
LIMS2-213ENST00000469300 KLK13Q9UKR3 277 aa12.96□□□□□ -0.34
LIMS2-213ENST00000469300 J3QR06 171 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 SLC25A5P05141 298 aaKnown RBP12.95□□□□□ -0.34
LIMS2-213ENST00000469300 SMIM17P0DL12 118 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 ATP5J2P56134 94 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 IL22RA2Q969J5 263 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 WDYHV1Q96HA8 205 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 HDHD3Q9BSH5 251 aaPredicted RBP12.95□□□□□ -0.34
LIMS2-213ENST00000469300 ZNF729A6NN14 1252 aaPredicted RBP12.95□□□□□ -0.34
LIMS2-213ENST00000469300 H0Y980 276 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 MMP9P14780 707 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 CRYBA2P53672 197 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 PRR27Q6MZM9 219 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 ZNF826PQ6ZT77 177 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 GPR179Q6PRD1 2367 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 IGHV1-69-2A0A0G2JMI3 117 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 COMPP49747 757 aaPredicted RBP12.95□□□□□ -0.34
LIMS2-213ENST00000469300 LYZP61626 148 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 PAX5Q02548 391 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 CALYQ9NYX4 217 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 JPT1Q9UK76 154 aa12.95□□□□□ -0.34
LIMS2-213ENST00000469300 EP400Q96L91 3159 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 FOXH1O75593 365 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 GALR1P47211 349 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 Q96M66 194 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 ELOVL1Q9BW60 279 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 IDI2-AS1Q9NZ38 188 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 LOC102724200A0A096LPH7 203 aaPredicted RBP12.94□□□□□ -0.34
LIMS2-213ENST00000469300 MMD2Q8IY49 270 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 ABHD14BQ96IU4 210 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 NKX2-6A6NCS4 301 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 CORTO00230 105 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 OR10J1P30954 320 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 RPL13AP40429 203 aaKnown RBP12.94□□□□□ -0.34
LIMS2-213ENST00000469300 RPL27AP46776 148 aaKnown RBP12.94□□□□□ -0.34
LIMS2-213ENST00000469300 GFRA1P56159 465 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 TMEM241Q24JQ0 296 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 LYZL2Q7Z4W2 148 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 NEU4Q8WWR8 484 aaPredicted RBP12.94□□□□□ -0.34
LIMS2-213ENST00000469300 CDRT15L2A8MXV6 281 aa12.94□□□□□ -0.34
LIMS2-213ENST00000469300 RAMP1O60894 148 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms