RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 EHFQ9NZC4 300 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 ONECUT1Q9UBC0 465 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 CLN8Q9UBY8 286 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 RBM7Q9Y580 266 aaKnown RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 DOPEY1Q5JWR5 2465 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 USF3Q68DE3 2245 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 FLNCQ14315 2725 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 UBR5O95071 2799 aaPredicted RBP3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 RAI1Q7Z5J4 1906 aaPredicted RBP3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 DOPEY2Q9Y3R5 2298 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 TRAV6A0A075B6T7 132 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 TRGV10A0A0A0MS01 117 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 PPIAL4CA0A0B4J2A2 164 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 IGHV4-61A0A0C4DH41 118 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 KIR2DS1A0A191URI9 304 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM240BA0A1B0GVZ2 78 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 A0A1W2PPE3 182 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 ANKRD20A5PA0PJZ0 165 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM157AC9JC47 383 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 C12orf77C9JDV5 145 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 SPINT2O43291 252 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 LYRM1O43325 122 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 FCN3O75636 299 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 NAPSAO96009 420 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 HBZP02008 142 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 RLN1P04808 185 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 HEXAP06865 529 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 PPIAL4GP0DN37 164 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 OR5H8P0DN80 308 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 PGAM2P15259 253 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 CCL3L1P16619 93 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 GZMHP20718 246 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 NFYAP23511 347 aaPredicted RBP3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 DTYMKP23919 212 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 GIFP27352 417 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 ERP29P30040 261 aaKnown RBP3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 FCGR2CP31995 323 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 SSTR5P35346 364 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 HRH1P35367 487 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 FAUP35544 74 aaKnown RBP3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 CEACAM6P40199 344 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 KIR2DS4P43632 304 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 KCNJ3P48549 501 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 NPY4RP50391 375 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 DLX1P56177 255 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 RAB25P57735 213 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 DSCR9P59020 149 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 FXYD4P59646 89 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 ACTBP60709 375 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 ARF6P62330 175 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 ACTG1P63261 375 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 HLA-DRB3P79483 266 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 SSBP1Q04837 148 aaKnown RBP3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF273Q14593 569 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 KIR2DS1Q14954 304 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 CDK10Q15131 360 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 RGS21Q2M5E4 152 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 TMEM155Q4W5P6 130 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 ESCO2Q56NI9 601 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 RNASE10Q5GAN6 216 aaKnown RBP3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 Q5PR19 223 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 C6orf183Q5T699 404 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 PXDC1Q5TGL8 231 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 PRAMEF5Q5TYX0 476 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 SHEQ5VZ18 495 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF880Q6PDB4 577 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF841Q6ZN19 808 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 PDZD9Q8IXQ8 264 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 OR5AP2Q8NGF4 316 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 OR51S1Q8NGJ8 323 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 OR4C16Q8NGL9 310 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 OR6F1Q8NGZ6 308 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 OR10J5Q8NHC4 309 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 MPLKIPQ8TAP9 179 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 ENKURQ8TC29 256 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 SNAPC3Q92966 411 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 LEAP2Q969E1 77 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 RAB39BQ96DA2 213 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 SLC6A7Q99884 636 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF2Q9BSG1 426 aaPredicted RBP3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 SUCNR1Q9BXA5 334 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 BEX2Q9BXY8 128 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM234AQ9H0X4 552 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 DNTTIP1Q9H147 329 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 DPAGT1Q9H3H5 408 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 SEBOXQ9HB31 216 aaPredicted RBP3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 BEX1Q9HBH7 125 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 OR2S2Q9NQN1 319 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 NECAP2Q9NVZ3 263 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 TAS2R8Q9NYW2 309 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 IDI2-AS1Q9NZ38 188 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 OR6C3Q9NZP0 311 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 OR1A1Q9P1Q5 309 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 KAAG1Q9UBP8 84 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF69Q9UC07 566 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 ANXA10Q9UJ72 324 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 RNF150Q9ULK6 438 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 TBC1D24Q9ULP9 559 aa3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 RBMX2Q9Y388 322 aaKnown RBP3.34□□□□□ -1.87
TMEM39A-204ENST00000468545 UTP20O75691 2785 aaKnown RBP3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms