RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SORL1Q92673 2214 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 TMEM14DPA8MWL7 114 aa19.01■□□□□ 0.63
PTCH1-210ENST00000468211 SLC22A1O15245 554 aa19.01■□□□□ 0.63
PTCH1-210ENST00000468211 SNRPBP14678 240 aaKnown RBP19.01■□□□□ 0.63
PTCH1-210ENST00000468211 SRMP19623 302 aa19.01■□□□□ 0.63
PTCH1-210ENST00000468211 C19orf54Q5BKX5 351 aa19.01■□□□□ 0.63
PTCH1-210ENST00000468211 GLDNQ6ZMI3 551 aaPredicted RBP19.01■□□□□ 0.63
PTCH1-210ENST00000468211 MINDY2Q8NBR6 621 aa19.01■□□□□ 0.63
PTCH1-210ENST00000468211 OR1N2Q8NGR9 330 aa19.01■□□□□ 0.63
PTCH1-210ENST00000468211 KCNG3Q8TAE7 436 aa19.01■□□□□ 0.63
PTCH1-210ENST00000468211 GFI1Q99684 422 aa19.01■□□□□ 0.63
PTCH1-210ENST00000468211 HDHD3Q9BSH5 251 aaPredicted RBP19.01■□□□□ 0.63
PTCH1-210ENST00000468211 ABRACLQ9P1F3 81 aa19.01■□□□□ 0.63
PTCH1-210ENST00000468211 VSIG4Q9Y279 399 aa19.01■□□□□ 0.63
PTCH1-210ENST00000468211 SOX15O60248 233 aa19■□□□□ 0.63
PTCH1-210ENST00000468211 CT45A6P0DMU7 189 aa19■□□□□ 0.63
PTCH1-210ENST00000468211 CT45A5P0DMU8 189 aa19■□□□□ 0.63
PTCH1-210ENST00000468211 CT45A7P0DMV0 189 aa19■□□□□ 0.63
PTCH1-210ENST00000468211 RAB9AP51151 201 aa19■□□□□ 0.63
PTCH1-210ENST00000468211 RUNX1Q01196 453 aa19■□□□□ 0.63
PTCH1-210ENST00000468211 SPHARQ15513 63 aa19■□□□□ 0.63
PTCH1-210ENST00000468211 HSD17B12Q53GQ0 312 aa19■□□□□ 0.63
PTCH1-210ENST00000468211 SETD6Q8TBK2 473 aa19■□□□□ 0.63
PTCH1-210ENST00000468211 ABHD14BQ96IU4 210 aa19■□□□□ 0.63
PTCH1-210ENST00000468211 ALX4Q9H161 411 aaPredicted RBP19■□□□□ 0.63
PTCH1-210ENST00000468211 CHMP1AQ9HD42 196 aaPredicted RBP19■□□□□ 0.63
PTCH1-210ENST00000468211 STEAP1Q9UHE8 339 aa19■□□□□ 0.63
PTCH1-210ENST00000468211 SOCS1O15524 211 aa18.99■□□□□ 0.63
PTCH1-210ENST00000468211 UCHL1P09936 223 aa18.99■□□□□ 0.63
PTCH1-210ENST00000468211 ZNF616Q08AN1 781 aa18.99■□□□□ 0.63
PTCH1-210ENST00000468211 CASTOR1Q8WTX7 329 aa18.99■□□□□ 0.63
PTCH1-210ENST00000468211 LPAR5Q9H1C0 372 aa18.99■□□□□ 0.63
PTCH1-210ENST00000468211 FBXL15Q9H469 300 aa18.99■□□□□ 0.63
PTCH1-210ENST00000468211 OR1A1Q9P1Q5 309 aa18.99■□□□□ 0.63
PTCH1-210ENST00000468211 SLC23A1Q9UHI7 598 aa18.99■□□□□ 0.63
PTCH1-210ENST00000468211 FCN1O00602 326 aa18.98■□□□□ 0.63
PTCH1-210ENST00000468211 IRF3Q14653 427 aa18.98■□□□□ 0.63
PTCH1-210ENST00000468211 MED22Q15528 200 aa18.98■□□□□ 0.63
PTCH1-210ENST00000468211 ECSCRQ19T08 205 aa18.98■□□□□ 0.63
PTCH1-210ENST00000468211 FAM71F2Q6NXP2 309 aa18.98■□□□□ 0.63
PTCH1-210ENST00000468211 TMEM203Q969S6 136 aa18.98■□□□□ 0.63
PTCH1-210ENST00000468211 AGMATQ9BSE5 352 aa18.98■□□□□ 0.63
PTCH1-210ENST00000468211 PIPOXQ9P0Z9 390 aa18.98■□□□□ 0.63
PTCH1-210ENST00000468211 KIAA1456Q9P272 454 aa18.98■□□□□ 0.63
PTCH1-210ENST00000468211 AK3Q9UIJ7 227 aa18.98■□□□□ 0.63
PTCH1-210ENST00000468211 ANKRD65E5RJM6 399 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 H0YJW9 148 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 RRHO14718 337 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 RAB29O14966 203 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 BPNT1O95861 308 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 OR8U8P0C7N1 319 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 NHLRC4P0CG21 123 aaPredicted RBP18.97■□□□□ 0.63
PTCH1-210ENST00000468211 EGR2P11161 476 aaPredicted RBP18.97■□□□□ 0.63
PTCH1-210ENST00000468211 CX3CL1P78423 397 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 P2RY14Q15391 338 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 LIPKQ5VXJ0 399 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 TMEM91Q6ZNR0 172 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 DCUN1D4Q92564 292 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 ASCL2Q99929 193 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 PLEKHJ1Q9NW61 149 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 ZNF256Q9Y2P7 627 aaPredicted RBP18.97■□□□□ 0.63
PTCH1-210ENST00000468211 U3KQK5 164 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 STAB2Q8WWQ8 2551 aa18.97■□□□□ 0.63
PTCH1-210ENST00000468211 FOXI3A8MTJ6 420 aaPredicted RBP18.96■□□□□ 0.63
PTCH1-210ENST00000468211 PROP1O75360 226 aa18.96■□□□□ 0.63
PTCH1-210ENST00000468211 OR6M1Q8NGM8 313 aa18.96■□□□□ 0.63
PTCH1-210ENST00000468211 NKX1-2Q9UD57 310 aaPredicted RBP18.96■□□□□ 0.63
PTCH1-210ENST00000468211 GAB2Q9UQC2 676 aa18.96■□□□□ 0.63
PTCH1-210ENST00000468211 A3GALT2U3KPV4 340 aa18.96■□□□□ 0.63
PTCH1-210ENST00000468211 TRBV6-6A0A0A6YYG2 114 aa18.95■□□□□ 0.62
PTCH1-210ENST00000468211 A0A1W2PN81 502 aa18.95■□□□□ 0.62
PTCH1-210ENST00000468211 CHRNA7P36544 502 aa18.95■□□□□ 0.62
PTCH1-210ENST00000468211 CRIP2P52943 208 aaPredicted RBP18.95■□□□□ 0.62
PTCH1-210ENST00000468211 LINC00205P59089 165 aa18.95■□□□□ 0.62
PTCH1-210ENST00000468211 MOB1BQ7L9L4 216 aa18.95■□□□□ 0.62
PTCH1-210ENST00000468211 FAM89BQ8N5H3 189 aa18.95■□□□□ 0.62
PTCH1-210ENST00000468211 C11orf54Q9H0W9 315 aaPredicted RBP18.95■□□□□ 0.62
PTCH1-210ENST00000468211 NUBP2Q9Y5Y2 271 aa18.95■□□□□ 0.62
PTCH1-210ENST00000468211 OR5H14A6NHG9 310 aa18.94■□□□□ 0.62
PTCH1-210ENST00000468211 SCTP09683 121 aa18.94■□□□□ 0.62
PTCH1-210ENST00000468211 SLURP1P55000 103 aa18.94■□□□□ 0.62
PTCH1-210ENST00000468211 TMEM50BP56557 158 aa18.94■□□□□ 0.62
PTCH1-210ENST00000468211 RPS25P62851 125 aaKnown RBP18.94■□□□□ 0.62
PTCH1-210ENST00000468211 ZNF660Q6AZW8 331 aaPredicted RBP18.94■□□□□ 0.62
PTCH1-210ENST00000468211 OR5AN1Q8NGI8 311 aa18.94■□□□□ 0.62
PTCH1-210ENST00000468211 DLX4Q92988 240 aaPredicted RBP18.94■□□□□ 0.62
PTCH1-210ENST00000468211 TPSG1Q9NRR2 321 aa18.94■□□□□ 0.62
PTCH1-210ENST00000468211 RNF150Q9ULK6 438 aa18.94■□□□□ 0.62
PTCH1-210ENST00000468211 AK6Q9Y3D8 172 aaKnown RBP18.94■□□□□ 0.62
PTCH1-210ENST00000468211 SLC17A2O00624 439 aa18.93■□□□□ 0.62
PTCH1-210ENST00000468211 ITGB1BP1O14713 200 aa18.93■□□□□ 0.62
PTCH1-210ENST00000468211 CEACAM6P40199 344 aa18.93■□□□□ 0.62
PTCH1-210ENST00000468211 HLA-DRB3P79483 266 aa18.93■□□□□ 0.62
PTCH1-210ENST00000468211 DRAXINQ8NBI3 349 aaPredicted RBP18.93■□□□□ 0.62
PTCH1-210ENST00000468211 UFD1Q92890 307 aa18.93■□□□□ 0.62
PTCH1-210ENST00000468211 FAM103A1Q9BTL3 118 aaKnown RBP18.93■□□□□ 0.62
PTCH1-210ENST00000468211 TOLLIPQ9H0E2 274 aa18.93■□□□□ 0.62
PTCH1-210ENST00000468211 VCXQ9H320 206 aa18.93■□□□□ 0.62
PTCH1-210ENST00000468211 RIMS4Q9H426 269 aaPredicted RBP18.93■□□□□ 0.62
PTCH1-210ENST00000468211 PLGRKTQ9HBL7 147 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms