RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ARRDC1Q8N5I2 433 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 OR6F1Q8NGZ6 308 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 RPEQ96AT9 228 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 SDHCQ99643 169 aaPredicted RBP12.33□□□□□ -0.44
SNIP1-202ENST00000468040 AGMATQ9BSE5 352 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 ZNF221Q9UK13 617 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 LY6LH3BQJ8 138 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 PPYP01298 95 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 OR8U9P0C7N5 309 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 FAM157CP0CG43 387 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 IL7P13232 177 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 AADACP22760 399 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 LUMP51884 338 aaPredicted RBP12.32□□□□□ -0.44
SNIP1-202ENST00000468040 ARHGDIBP52566 201 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 HERV-K104P61576 105 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 KLF9Q13886 244 aaPredicted RBP12.32□□□□□ -0.44
SNIP1-202ENST00000468040 SSX2Q16385 188 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 BAK1Q16611 211 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 TPTE2P1Q5T6R2 138 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 ZNF660Q6AZW8 331 aaPredicted RBP12.32□□□□□ -0.44
SNIP1-202ENST00000468040 FAM71F2Q6NXP2 309 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 BCL6BQ8N143 479 aaPredicted RBP12.32□□□□□ -0.44
SNIP1-202ENST00000468040 OR8U1Q8NH10 309 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 C22orf15Q8WYQ4 148 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 TOMM40LQ969M1 308 aa12.32□□□□□ -0.44
SNIP1-202ENST00000468040 ZNF2Q9BSG1 426 aaPredicted RBP12.32□□□□□ -0.44
SNIP1-202ENST00000468040 TINAGL1Q9GZM7 467 aaPredicted RBP12.32□□□□□ -0.44
SNIP1-202ENST00000468040 SAA2-SAA4A0A096LPE2 208 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 HSD17B6O14756 317 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 TXNL1O43396 289 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 SLC22A5O76082 557 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 AMY2AP04746 511 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 SAA2P0DJI9 122 aaPredicted RBP12.31□□□□□ -0.44
SNIP1-202ENST00000468040 GPR12P47775 334 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 LDLRAD2Q5SZI1 272 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 ZNF57Q68EA5 555 aaPredicted RBP12.31□□□□□ -0.44
SNIP1-202ENST00000468040 ODF3L1Q8IXM7 274 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.31□□□□□ -0.44
SNIP1-202ENST00000468040 OR4D10Q8NGI6 311 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 OR4C16Q8NGL9 310 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 C17orf50Q8WW18 174 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 ST6GALNAC6Q969X2 333 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 MOB3AQ96BX8 217 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 AJUBAQ96IF1 538 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 ABHD14BQ96IU4 210 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 S1PR3Q99500 378 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 OR2D2Q9H210 308 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 GAB2Q9UQC2 676 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 HILPDAQ9Y5L2 63 aa12.31□□□□□ -0.44
SNIP1-202ENST00000468040 SONP18583 2426 aaKnown RBP12.3□□□□□ -0.44
SNIP1-202ENST00000468040 DISC1C4P0D8 188 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 GAPDHP04406 335 aaKnown RBP12.3□□□□□ -0.44
SNIP1-202ENST00000468040 FXYD4P59646 89 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 ZNF816Q0VGE8 651 aaPredicted RBP12.3□□□□□ -0.44
SNIP1-202ENST00000468040 TUSC1Q2TAM9 212 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 DEFB112Q30KQ8 113 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 RBMS3Q6XE24 437 aaKnown RBP12.3□□□□□ -0.44
SNIP1-202ENST00000468040 ZNF833PQ6ZTB9 187 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 TGIF2LXQ8IUE1 241 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 OR8H3Q8N146 312 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 RTN4IP1Q8WWV3 396 aaPredicted RBP12.3□□□□□ -0.44
SNIP1-202ENST00000468040 BORCS5Q969J3 196 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 ZDHHC16Q969W1 377 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 TSC22D3Q99576 134 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 SLC6A7Q99884 636 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 PRRT1Q99946 306 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 MEGF9Q9H1U4 602 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 PRDM13Q9H4Q3 707 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 RNF150Q9ULK6 438 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 SOX21Q9Y651 276 aaPredicted RBP12.3□□□□□ -0.44
SNIP1-202ENST00000468040 NAV3Q8IVL0 2385 aa12.3□□□□□ -0.44
SNIP1-202ENST00000468040 IGKV1D-13A0A0B4J2D9 117 aa12.29□□□□□ -0.44
SNIP1-202ENST00000468040 J3QRK9 145 aa12.29□□□□□ -0.44
SNIP1-202ENST00000468040 IGKV1-13P0DP09 117 aa12.29□□□□□ -0.44
SNIP1-202ENST00000468040 MSMO1Q15800 293 aa12.29□□□□□ -0.44
SNIP1-202ENST00000468040 AANATQ16613 207 aa12.29□□□□□ -0.44
SNIP1-202ENST00000468040 FAAP20Q6NZ36 180 aa12.29□□□□□ -0.44
SNIP1-202ENST00000468040 LDLRAD3Q86YD5 345 aa12.29□□□□□ -0.44
SNIP1-202ENST00000468040 ZNF645Q8N7E2 425 aa12.29□□□□□ -0.44
SNIP1-202ENST00000468040 OR56B4Q8NH76 319 aa12.29□□□□□ -0.44
SNIP1-202ENST00000468040 SECTM1Q8WVN6 248 aa12.29□□□□□ -0.44
SNIP1-202ENST00000468040 MCUBQ9NWR8 336 aa12.29□□□□□ -0.44
SNIP1-202ENST00000468040 SLC2A8Q9NY64 477 aa12.29□□□□□ -0.44
SNIP1-202ENST00000468040 MDFIC2A0A1B0GVS7 189 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 CENPXA8MT69 81 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 VGLL3A8MV65 326 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 ZNF735P0CB33 412 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 BRS3P32247 399 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 ECI1P42126 302 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 REG1BP48304 166 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 DYNLT3P51808 116 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 SCGB2B2Q4G0G5 96 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 PLA1AQ53H76 456 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 LPCAT3Q6P1A2 487 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 Q6YL49 198 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 LHFPL1Q86WI0 220 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 DYNAPQ8N1N2 210 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 TERB2Q8NHR7 220 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 ZNF418Q8TF45 676 aaPredicted RBP12.28□□□□□ -0.44
SNIP1-202ENST00000468040 ZNF48Q96MX3 618 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms