RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 FTCDNL1E5RQL4 147 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 H3BQF6 201 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 FAAHO00519 579 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 PHYHO14832 338 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 LSM1O15116 133 aaKnown RBP1.9□□□□□ -2.11
XRN1-206ENST00000467077 SLC31A2O15432 143 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 OR2T1O43869 369 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 CPSF4O95639 269 aaKnown RBP1.9□□□□□ -2.11
XRN1-206ENST00000467077 CYB5R3P00387 301 aaPredicted RBP1.9□□□□□ -2.11
XRN1-206ENST00000467077 OPN1SWP03999 348 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 IFNW1P05000 195 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 ALDOBP05062 364 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 DBIP07108 87 aaKnown RBP1.9□□□□□ -2.11
XRN1-206ENST00000467077 MYL2P10916 166 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 NEFHP12036 1026 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 TCP1P17987 556 aaKnown RBP1.9□□□□□ -2.11
XRN1-206ENST00000467077 PRPS1L1P21108 318 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 SLC2A5P22732 501 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 GRPRP30550 384 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 VHLP40337 213 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 MAGEA12P43365 314 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 NPBWR2P48146 333 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 CSNK1A1P48729 337 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 GDI2P50395 445 aaKnown RBP1.9□□□□□ -2.11
XRN1-206ENST00000467077 SERPINB9P50453 376 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 CCR6P51684 374 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 CRISP3P54108 245 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 ARF6P62330 175 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 SLC35A2P78381 396 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 HOXC5Q00444 222 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 CAV1Q03135 178 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 C2orf54Q08AI8 447 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 FUT5Q11128 374 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 LY6EQ16553 131 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 ZNF404Q494X3 552 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 PABPC1L2AQ5JQF8 200 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 FAM201AQ5SY85 155 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 AP1ARQ63HQ0 302 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 ZFAND6Q6FIF0 208 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 CNIH2Q6PI25 160 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 ARL9Q6T311 187 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 LRRC74BQ6ZQY2 392 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 Q6ZR03 302 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 VMO1Q7Z5L0 202 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 DPPA2Q7Z7J5 298 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 EGFL6Q8IUX8 553 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 SAXO1Q8IYX7 474 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 CLECL1Q8IZS7 167 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 KRTCAP2Q8N6L1 136 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 C19orf18Q8NEA5 215 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 OR51G1Q8NGK1 321 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 OR4A15Q8NGL6 344 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 OR2G3Q8NGZ4 309 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 OR52P1PQ8NH57 321 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 AKR7LQ8NHP1 331 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 ZNF420Q8TAQ5 688 aaPredicted RBP1.9□□□□□ -2.11
XRN1-206ENST00000467077 AGR3Q8TD06 166 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 SLC38A4Q969I6 547 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 TMEM54Q969K7 222 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 OR2V2Q96R30 315 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 SORT1Q99523 831 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 NAPGQ99747 312 aaPredicted RBP1.9□□□□□ -2.11
XRN1-206ENST00000467077 HDHD3Q9BSH5 251 aaPredicted RBP1.9□□□□□ -2.11
XRN1-206ENST00000467077 C1orf50Q9BV19 199 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 CHID1Q9BWS9 393 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 MFFQ9GZY8 342 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 CACYBPQ9HB71 228 aaKnown RBP1.9□□□□□ -2.11
XRN1-206ENST00000467077 TMEM38BQ9NVV0 291 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 GLTPQ9NZD2 209 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 ZNRD1Q9P1U0 126 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 SLC17A7Q9P2U7 560 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 NUFIP1Q9UHK0 495 aaKnown RBP1.9□□□□□ -2.11
XRN1-206ENST00000467077 RPUSD1Q9UJJ7 312 aaKnown RBP1.9□□□□□ -2.11
XRN1-206ENST00000467077 UTP11Q9Y3A2 253 aaKnown RBP1.9□□□□□ -2.11
XRN1-206ENST00000467077 N6AMT1Q9Y5N5 214 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 FRAS1Q86XX4 4008 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 IGKV1D-17A0A075B6S4 117 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 TRAV36DV7A0A075B6V5 113 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 A0A087WUJ7 227 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 A0A1B0GVI7 797 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 H3BSA7 217 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 HMGN4O00479 90 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 PEX7O00628 323 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 PLPP3O14495 311 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 AZIN1O14977 448 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 NPFFO15130 113 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 ANGPTL7O43827 346 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 TMEM50AO95807 157 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 CLIC3O95833 236 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 C1QCP02747 245 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 GUSBP08236 651 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 MMP7P09237 267 aaPredicted RBP1.89□□□□□ -2.11
XRN1-206ENST00000467077 ZNF823P16415 610 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 GSTM3P21266 225 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 RPS4Y1P22090 263 aaKnown RBP1.89□□□□□ -2.11
XRN1-206ENST00000467077 YAP1P46937 504 aaKnown RBP1.89□□□□□ -2.11
XRN1-206ENST00000467077 NMUP48645 174 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 SRP9P49458 86 aaKnown RBP1.89□□□□□ -2.11
XRN1-206ENST00000467077 FGF8P55075 233 aaPredicted RBP1.89□□□□□ -2.11
XRN1-206ENST00000467077 NAA20P61599 178 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms