RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 TAS2R20P59543 309 aa14.21□□□□□ -0.13
COL7A1-205ENST00000465238 LIAT1Q6ZQX7 453 aa14.21□□□□□ -0.13
COL7A1-205ENST00000465238 LYG1Q8N1E2 194 aa14.21□□□□□ -0.13
COL7A1-205ENST00000465238 OR2T6Q8NHC8 308 aa14.21□□□□□ -0.13
COL7A1-205ENST00000465238 PIFOQ8TCI5 191 aa14.21□□□□□ -0.13
COL7A1-205ENST00000465238 OR1A1Q9P1Q5 309 aa14.21□□□□□ -0.13
COL7A1-205ENST00000465238 RSL24D1Q9UHA3 163 aaKnown RBP14.21□□□□□ -0.13
COL7A1-205ENST00000465238 MRPS7Q9Y2R9 242 aaKnown RBP14.21□□□□□ -0.13
COL7A1-205ENST00000465238 IGKV1-6A0A0C4DH72 117 aa14.2□□□□□ -0.14
COL7A1-205ENST00000465238 HSD17B6O14756 317 aa14.2□□□□□ -0.14
COL7A1-205ENST00000465238 BET1O15155 118 aa14.2□□□□□ -0.14
COL7A1-205ENST00000465238 RGS5O15539 181 aa14.2□□□□□ -0.14
COL7A1-205ENST00000465238 CBX5P45973 191 aa14.2□□□□□ -0.14
COL7A1-205ENST00000465238 DIAPH2-AS1Q14236 149 aa14.2□□□□□ -0.14
COL7A1-205ENST00000465238 IGSF11Q5DX21 431 aa14.2□□□□□ -0.14
COL7A1-205ENST00000465238 OR10J5Q8NHC4 309 aa14.2□□□□□ -0.14
COL7A1-205ENST00000465238 EDARADDQ8WWZ3 215 aa14.2□□□□□ -0.14
COL7A1-205ENST00000465238 NPFFR1Q9GZQ6 430 aa14.2□□□□□ -0.14
COL7A1-205ENST00000465238 PITPNC1Q9UKF7 332 aa14.2□□□□□ -0.14
COL7A1-205ENST00000465238 SIGLEC9Q9Y336 463 aa14.2□□□□□ -0.14
COL7A1-205ENST00000465238 DIRAS3O95661 229 aa14.19□□□□□ -0.14
COL7A1-205ENST00000465238 PTHLHP12272 177 aa14.19□□□□□ -0.14
COL7A1-205ENST00000465238 PRSS3P35030 304 aa14.19□□□□□ -0.14
COL7A1-205ENST00000465238 ZNF816Q0VGE8 651 aaPredicted RBP14.19□□□□□ -0.14
COL7A1-205ENST00000465238 OR8H3Q8N146 312 aa14.19□□□□□ -0.14
COL7A1-205ENST00000465238 GINS4Q9BRT9 223 aa14.19□□□□□ -0.14
COL7A1-205ENST00000465238 CABLES2Q9BTV7 478 aa14.19□□□□□ -0.14
COL7A1-205ENST00000465238 RBM38Q9H0Z9 239 aaKnown RBP14.19□□□□□ -0.14
COL7A1-205ENST00000465238 RDH8Q9NYR8 311 aa14.19□□□□□ -0.14
COL7A1-205ENST00000465238 ADAM30Q9UKF2 790 aa14.19□□□□□ -0.14
COL7A1-205ENST00000465238 TCF19Q9Y242 345 aa14.19□□□□□ -0.14
COL7A1-205ENST00000465238 IGKV1D-8A0A087WSZ0 117 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 TRBV6-7A0A0A0MS04 114 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 ZNF701M0R085 212 aaPredicted RBP14.18□□□□□ -0.14
COL7A1-205ENST00000465238 ITGB1BP1O14713 200 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 ST8SIA5O15466 376 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 CTXN2P0C2S0 81 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 REG1BP48304 166 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 MOB3BQ86TA1 216 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 HOGA1Q86XE5 327 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 C1QL4Q86Z23 238 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 TGIF2LXQ8IUE1 241 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 KLHDC1Q8N7A1 406 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 CAPSLQ8WWF8 208 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 CFHR4Q92496 578 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 ST6GALNAC6Q969X2 333 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 C11orf54Q9H0W9 315 aaPredicted RBP14.18□□□□□ -0.14
COL7A1-205ENST00000465238 GHITMQ9H3K2 345 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 NDUFA13Q9P0J0 144 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 EXTL2Q9UBQ6 330 aa14.18□□□□□ -0.14
COL7A1-205ENST00000465238 IGHV1-3A0A0C4DH29 117 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 A0A1W2PPI3 338 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 A6NDX4 124 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 CTDSP2O14595 271 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 TXNL1O43396 289 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 CHST1O43916 411 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 FAM106CPP0CH98 169 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 CD24P25063 80 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 ZNF137PP52743 207 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 ARPC4P59998 168 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 CNIH2Q6PI25 160 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 DRAM1Q8N682 238 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 BEST4Q8NFU0 473 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 RTN4IP1Q8WWV3 396 aaPredicted RBP14.17□□□□□ -0.14
COL7A1-205ENST00000465238 C6orf62Q9GZU0 229 aaPredicted RBP14.17□□□□□ -0.14
COL7A1-205ENST00000465238 PARP12Q9H0J9 701 aaKnown RBP14.17□□□□□ -0.14
COL7A1-205ENST00000465238 IFT46Q9NQC8 304 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 PIPOXQ9P0Z9 390 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 ANXA10Q9UJ72 324 aa14.17□□□□□ -0.14
COL7A1-205ENST00000465238 RAB29O14966 203 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 PLXNB1O43157 2135 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 LANCL1O43813 399 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 HLA-DQB1P01920 261 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 OPN1MWP04001 364 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 OPN1MW2P0DN77 364 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 OPN1MW3P0DN78 364 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 TMEM219Q86XT9 240 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 THNSL2Q86YJ6 484 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 SNX29P2Q8IUI4 249 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 GVQW1Q8N7I0 195 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 OR56B4Q8NH76 319 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 MCFD2Q8NI22 146 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 S1PR3Q99500 378 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 DCUN1D5Q9BTE7 237 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 SLIRPQ9GZT3 109 aaKnown RBP14.16□□□□□ -0.14
COL7A1-205ENST00000465238 TOLLIPQ9H0E2 274 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 MIXL1Q9H2W2 232 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 IFI27L2Q9H2X8 130 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 ZNF221Q9UK13 617 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 RNF150Q9ULK6 438 aa14.16□□□□□ -0.14
COL7A1-205ENST00000465238 SAA2-SAA4A0A096LPE2 208 aa14.15□□□□□ -0.14
COL7A1-205ENST00000465238 MEIS3P1A6NDR6 274 aa14.15□□□□□ -0.14
COL7A1-205ENST00000465238 FCER2P06734 321 aa14.15□□□□□ -0.14
COL7A1-205ENST00000465238 SAA2P0DJI9 122 aaPredicted RBP14.15□□□□□ -0.14
COL7A1-205ENST00000465238 OR3A3P47888 321 aa14.15□□□□□ -0.14
COL7A1-205ENST00000465238 HES1Q14469 280 aa14.15□□□□□ -0.14
COL7A1-205ENST00000465238 CCBE1Q6UXH8 406 aaPredicted RBP14.15□□□□□ -0.14
COL7A1-205ENST00000465238 ODF3L1Q8IXM7 274 aa14.15□□□□□ -0.14
COL7A1-205ENST00000465238 C11orf44Q8N8P7 122 aa14.15□□□□□ -0.14
COL7A1-205ENST00000465238 C15orf40Q8WUR7 153 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms