RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.14□□□□□ -2.07
HMGXB4-205ENST00000464480 SPANXCQ9NY87 97 aa2.14□□□□□ -2.07
HMGXB4-205ENST00000464480 FBXO5Q9UKT4 447 aa2.14□□□□□ -2.07
HMGXB4-205ENST00000464480 HHLA2Q9UM44 414 aa2.14□□□□□ -2.07
HMGXB4-205ENST00000464480 CFAP43Q8NDM7 1665 aa2.14□□□□□ -2.07
HMGXB4-205ENST00000464480 TROQ12816 1431 aaPredicted RBP2.14□□□□□ -2.07
HMGXB4-205ENST00000464480 CD109Q6YHK3 1445 aa2.14□□□□□ -2.07
HMGXB4-205ENST00000464480 DIP2AQ14689 1571 aa2.14□□□□□ -2.07
HMGXB4-205ENST00000464480 MBD5Q9P267 1494 aa2.14□□□□□ -2.07
HMGXB4-205ENST00000464480 FLT4P35916 1363 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 MYH4Q9Y623 1939 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 NUP214P35658 2090 aaPredicted RBP2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 CENPVL3A0A0U1RRI6 287 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 OR5H14A6NHG9 310 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 A8MWP6 167 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 NDUFC2-KCTD14E9PQ53 114 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 CLDN34H7C241 214 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 PDCD5O14737 125 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 SIVA1O15304 175 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 ERI3O43414 337 aaKnown RBP2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 MPDU1O75352 247 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 ATG12O94817 140 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 KCNK2O95069 426 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 S1PR2O95136 353 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 FARS2O95363 451 aaKnown RBP2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 IGHV3-11P01762 117 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 C1QCP02747 245 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 CD74P04233 296 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 SHBGP04278 402 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 IL4P05112 153 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 ISG15P05161 165 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 SERPINA7P05543 415 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 ZNF286BP0CG31 522 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 ZNF14P17017 642 aaPredicted RBP2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 AKR1C4P17516 323 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 COILP38432 576 aaPredicted RBP2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 EVX1P49640 407 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 NDUFA8P51970 172 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 CKS1BP61024 79 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 UBE2KP61086 200 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 MAXP61244 160 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 TBPL1P62380 186 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 RANP62826 216 aaKnown RBP2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 LCN2P80188 198 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 DEFA5Q01523 94 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 IFITM3Q01628 133 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 PRKCDQ05655 676 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 BAXQ07812 192 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 ZNF816Q0VGE8 651 aaPredicted RBP2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 MOBPQ13875 183 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 PEA15Q15121 130 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 RHEBQ15382 184 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 RSU1Q15404 277 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 ZBTB6Q15916 424 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 GABRA6Q16445 453 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 SCGB2B2Q4G0G5 96 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 PYCR3Q53H96 274 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 OCIAD2Q56VL3 154 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 SYPL2Q5VXT5 272 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 WDR59Q6PJI9 974 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 TMPRSS11AQ6ZMR5 421 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 TMPPEQ6ZT21 453 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 CMTM8Q8IZV2 173 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 OR6V1Q8N148 313 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 ZNF615Q8N8J6 731 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 ZNF709Q8N972 641 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 OR1J4Q8NGS1 313 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 OR52P1PQ8NH57 321 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 ZNF431Q8TF32 576 aaPredicted RBP2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 TMEM159Q96B96 161 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 REEP6Q96HR9 211 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 BTF3L4Q96K17 158 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 LINC00052Q96N35 136 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 OR2M4Q96R27 311 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 OR7D2Q96RA2 312 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 OR52E6Q96RD3 313 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 S100A13Q99584 98 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 CMSS1Q9BQ75 279 aaKnown RBP2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 PBDC1Q9BVG4 233 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 GGTLC1Q9BX51 225 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 SAMD10Q9BYL1 202 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 DEFB129Q9H1M3 183 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 TXNIPQ9H3M7 391 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 MFSD1Q9H3U5 465 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 DSN1Q9H410 356 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 EXOSC4Q9NPD3 245 aaKnown RBP2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 SMCO4Q9NRQ5 59 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 VPS29Q9UBQ0 182 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 ZNF230Q9UIE0 474 aaPredicted RBP2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 NXT1Q9UKK6 140 aaKnown RBP2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 NOS1P29475 1434 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 RIC1Q4ADV7 1423 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 NSD3Q9BZ95 1437 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 ADAMTS12P58397 1594 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 ABCB11O95342 1321 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 MYOM2P54296 1465 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 GRIN2AQ12879 1464 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 SNAPC4Q5SXM2 1469 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 NEO1Q92859 1461 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms