RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 TM4SF4P48230 202 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 MESP2Q0VG99 397 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 TMEM249Q2WGJ8 235 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 SNAI3Q3KNW1 292 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 LRRC10Q5BKY1 277 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 RHBDD2Q6NTF9 364 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 LINC00596Q86U02 117 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 WDFY1Q8IWB7 410 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 LYG1Q8N1E2 194 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 ZBTB34Q8NCN2 500 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 OR1F12Q8NHA8 337 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 IL1F10Q8WWZ1 152 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 BCL2L2Q92843 193 aaPredicted RBP3.31□□□□□ -1.88
CCNL1-204ENST00000464316 KCNS1Q96KK3 526 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 OR6C1Q96RD1 312 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 CSTL1Q9H114 145 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 CST9LQ9H4G1 147 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 GPR27Q9NS67 375 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 TAAR3PQ9P1P4 343 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 PEF1Q9UBV8 284 aaKnown RBP3.31□□□□□ -1.88
CCNL1-204ENST00000464316 CLN8Q9UBY8 286 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 IL19Q9UHD0 177 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 LY96Q9Y6Y9 160 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 MLNRO43193 412 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 ZNF324O75467 553 aaPredicted RBP3.31□□□□□ -1.88
CCNL1-204ENST00000464316 TUSC2O75896 110 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 PSG2P11465 335 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 CEACAM8P31997 349 aaPredicted RBP3.31□□□□□ -1.88
CCNL1-204ENST00000464316 TIMP3P35625 211 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 MLF1P58340 268 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 FAM27BQ5VT28 67 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 UNQ5815/PRO19632Q6UWF5 114 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 SYT13Q7L8C5 426 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 MMD2Q8IY49 270 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 SAXO1Q8IYX7 474 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 ZNF611Q8N823 705 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 APOBEC3DQ96AK3 386 aaPredicted RBP3.31□□□□□ -1.88
CCNL1-204ENST00000464316 ALKBH3Q96Q83 286 aaPredicted RBP3.31□□□□□ -1.88
CCNL1-204ENST00000464316 TMEM191AQ9H0A3 160 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 ZNF430Q9H8G1 570 aaPredicted RBP3.31□□□□□ -1.88
CCNL1-204ENST00000464316 LANCL2Q9NS86 450 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 SERTAD4Q9NUC0 356 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 WASHC3Q9Y3C0 194 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 SAA2-SAA4A0A096LPE2 208 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 IGHV2-26A0A0B4J1V2 119 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 GAGE10A6NGK3 116 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 H0Y8X5 98 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 ZFAND5O76080 213 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 APCSP02743 223 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 SCTP09683 121 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 BMI1P35226 326 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 CAPZBP47756 277 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 TRIM61Q5EBN2 209 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 C10orf128Q5T292 105 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 DCAF12Q5T6F0 453 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 ZNF324BQ6AW86 544 aaPredicted RBP3.31□□□□□ -1.88
CCNL1-204ENST00000464316 SLC25A34Q6PIV7 304 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 Q6ZSR3 168 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 MYPOPQ86VE0 399 aaPredicted RBP3.31□□□□□ -1.88
CCNL1-204ENST00000464316 SCCPDHQ8NBX0 429 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 OR52L2PQ8NGH6 319 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 RAB1CQ92928 201 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 KLHDC7BQ96G42 594 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 LOXL4Q96JB6 756 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 LYZL4Q96KX0 146 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 PLEKHA3Q9HB20 300 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 PNRC2Q9NPJ4 139 aaKnown RBP3.31□□□□□ -1.88
CCNL1-204ENST00000464316 PPP1R3CQ9UQK1 317 aa3.31□□□□□ -1.88
CCNL1-204ENST00000464316 A0A1W2PNR3 127 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 C2orf72A6NCS6 295 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 OR5B21A6NL26 309 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 TMEM238C9JI98 176 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 M0R2Z0 102 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 TNFSF11O14788 317 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 OR7C2O60412 319 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 YPEL1O60688 119 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 TNFSF15O95150 251 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 IGLV3-1P01715 115 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 CRYAAP02489 173 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 CLPSP04118 112 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 CD33P20138 364 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 GNG4P50150 75 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 SELENOVP59797 346 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 FGF12P61328 243 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 RHOBP62745 196 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 C1orf61Q13536 156 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 RNPS1Q15287 305 aaKnown RBP3.3□□□□□ -1.88
CCNL1-204ENST00000464316 TCF23Q7RTU1 214 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 H2BFWTQ7Z2G1 175 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 MRPL21Q7Z2W9 205 aaKnown RBP3.3□□□□□ -1.88
CCNL1-204ENST00000464316 CALHM1Q8IU99 346 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 OR10G3Q8NGC4 313 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 YPEL2Q96QA6 119 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 PMCHL2Q9BQD1 86 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 RTN4RQ9BZR6 473 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 CHRNA10Q9GZZ6 450 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 ST20Q9HBF5 79 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 MRPL27Q9P0M9 148 aaKnown RBP3.3□□□□□ -1.88
CCNL1-204ENST00000464316 C19orf25Q9UFG5 118 aaPredicted RBP3.3□□□□□ -1.88
CCNL1-204ENST00000464316 CD207Q9UJ71 328 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms