RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 DIRC2Q96SL1 478 aa6.12□□□□□ -1.43
CLSTN1-204ENST00000464286 TMEM208Q9BTX3 173 aa6.12□□□□□ -1.43
CLSTN1-204ENST00000464286 RSG1Q9BU20 258 aa6.12□□□□□ -1.43
CLSTN1-204ENST00000464286 OR2H1Q9GZK4 316 aa6.12□□□□□ -1.43
CLSTN1-204ENST00000464286 CCL28Q9NRJ3 127 aa6.12□□□□□ -1.43
CLSTN1-204ENST00000464286 TMEM106BQ9NUM4 274 aa6.12□□□□□ -1.43
CLSTN1-204ENST00000464286 CACNG5Q9UF02 275 aa6.12□□□□□ -1.43
CLSTN1-204ENST00000464286 LY96Q9Y6Y9 160 aa6.12□□□□□ -1.43
CLSTN1-204ENST00000464286 PCNX3Q9H6A9 2034 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 IGKV1-27A0A075B6S5 117 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 UBE2L5PA0A1B0GUS4 154 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 C17orf51A8MQB3 221 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 CBR3O75828 277 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 REG1AP05451 166 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 UMODP07911 640 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 GLI4P10075 376 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 SRFP11831 508 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 RAC2P15153 192 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 G0S2P27469 103 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 CD82P27701 267 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 PTGDSP41222 190 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 RPL29P47914 159 aaKnown RBP6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 ELLP55199 621 aaPredicted RBP6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 CASP6P55212 293 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 SOX8P57073 446 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 P2RY6Q15077 328 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 IGFBP7Q16270 282 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 RSPO1Q2MKA7 263 aaPredicted RBP6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 SPANXN5Q5MJ07 72 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 FAM162BQ5T6X4 162 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 FAM78BQ5VT40 261 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 RAET1LQ5VY80 246 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 FAM180AQ6UWF9 173 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 TEX43Q6ZNM6 134 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 SSX7Q7RTT5 188 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 AAED1Q7RTV5 226 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 MRPL21Q7Z2W9 205 aaKnown RBP6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 NUFIP2Q7Z417 695 aaKnown RBP6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 TMEM144Q7Z5S9 345 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 WDFY1Q8IWB7 410 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 SFTPA2Q8IWL1 248 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 SIGLECL1Q8N7X8 197 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 OR10G3Q8NGC4 313 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 OR51H1Q8NH63 302 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 BADQ92934 168 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 APOBEC3DQ96AK3 386 aaPredicted RBP6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 UHRF2Q96PU4 802 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 OR4C12Q96R67 309 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 RNF2Q99496 336 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 C1QTNF5Q9BXJ0 243 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 PKIBQ9C010 78 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 GAL3ST2Q9H3Q3 398 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 ZDHHC11Q9H8X9 412 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 WDR54Q9H977 334 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 KCNIP1Q9NZI2 227 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 UQCR10Q9UDW1 63 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 RARRES3Q9UL19 164 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 ZFP30Q9Y2G7 519 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 WIPI2Q9Y4P8 454 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 RBM7Q9Y580 266 aaKnown RBP6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 MPC1Q9Y5U8 109 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 ARL2-SNX15V9GYD0 113 aa6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 TNRC6BQ9UPQ9 1833 aaKnown RBP6.11□□□□□ -1.43
CLSTN1-204ENST00000464286 TRAV39A0A0B4J263 110 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 IGKV1-12A0A0C4DH73 117 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 A0A1W2PPV4 95 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 ANKRD30BLA7E2S9 258 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 C11orf94C9JXX5 98 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 E9PLN8 166 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 HS3ST1O14792 307 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 MLNRO43193 412 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 CLDN1O95832 211 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 IL18BPO95998 194 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 IGKV1D-12P01611 117 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 OR4A8P0C604 315 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 LIFP15018 202 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 CRISP2P16562 243 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 ZNF32P17041 273 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 IL3RAP26951 378 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 PLA2G5P39877 138 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 MPLP40238 635 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 CDC34P49427 236 aaPredicted RBP6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 FGF8P55075 233 aaPredicted RBP6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 RPL15P61313 204 aaKnown RBP6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 SUMO1P63165 101 aaKnown RBP6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 PLGLB1Q02325 96 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 Q0VG73 95 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 COTL1Q14019 142 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 TESK1Q15569 626 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 ZNF726P1Q15940 193 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 VWC2Q2TAL6 325 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 FFAR4Q5NUL3 377 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 ZNF324BQ6AW86 544 aaPredicted RBP6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 CYB5R2Q6BCY4 276 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 TEX38Q6PEX7 206 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 UNQ6494/PRO21346Q6UXR6 183 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 TMPRSS7Q7RTY8 843 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 C5orf24Q7Z6I8 188 aa6.1□□□□□ -1.43
CLSTN1-204ENST00000464286 BAGE3Q86Y29 109 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms