RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 STPG4Q8N801 248 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 CCDC71LQ8N9Z2 235 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 ZNF519Q8TB69 540 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 RPUSD4Q96CM3 377 aaKnown RBP9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 MSI2Q96DH6 328 aaKnown RBP9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 ARHGAP5-AS1Q96IT6 56 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 SMIM7Q9BQ49 75 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 NICN1Q9BSH3 213 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 TM2D1Q9BX74 207 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 EML6Q6ZMW3 1958 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 IGLV3-32A0A0A0MS00 114 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 IGSF23A1L1A6 192 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 K7ERU9 68 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 CSTAP01040 98 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 TNFSF4P23510 183 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 ERVS71-1P61550 626 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 SERF2P84101 59 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 FOXL1Q12952 345 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 CD226Q15762 336 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 ADIRFQ15847 76 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 KRTCAP3Q53RY4 240 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 FNDC7Q5VTL7 733 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 C10orf53Q8N6V4 93 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 GATSQ8NAP1 163 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 ZDHHC11Q9H8X9 412 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 RPH3ALQ9UNE2 315 aa9.81□□□□□ -0.84
TRAPPC3-205ENST00000462715 CBY3A6NI87 242 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 SDCBPO00560 298 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 HLA-HP01893 362 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 MAGEA5P43359 124 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 PIGPP57054 158 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 RPL27P61353 136 aaKnown RBP9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 OCIAD2Q56VL3 154 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 RNFT1Q5M7Z0 435 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 ZNF324BQ6AW86 544 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 DNM1P34Q6PK57 102 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 Q6ZWC4 215 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 C1orf174Q8IYL3 243 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 FADS6Q8N9I5 356 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 PINX1Q96BK5 328 aaKnown RBP9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 SLAMF6Q96DU3 332 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 ST6GALNAC5Q9BVH7 336 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 RTN4RQ9BZR6 473 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 TRAPPC1Q9Y5R8 145 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 NPIPA5E9PKD4 350 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 LILRA1O75019 489 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 TRAPPC6AO75865 159 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 MT-ATP6P00846 226 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 RFPL3SP0C7P2 107 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 AADACP22760 399 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 RPS27P42677 84 aaKnown RBP9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 NKX2-1P43699 371 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 SUMO3P55854 103 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 DSCR4P56555 118 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 RNF151Q2KHN1 245 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 ABCA11PQ4W5N1 156 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 TMEM144Q7Z5S9 345 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 OR2M3Q8NG83 312 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 RTN4IP1Q8WWV3 396 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 GMPPAQ96IJ6 420 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 ZNF701Q9NV72 531 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 NPIPA1Q9UND3 350 aa9.8□□□□□ -0.84
TRAPPC3-205ENST00000462715 FAM24AA6NFZ4 105 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 H7C1C5 153 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 MSTNO14793 375 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 IFNA5P01569 189 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 ZNF728P0DKX0 622 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 MSR1P21757 451 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 TUBG1P23258 451 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 SRD5A2P31213 254 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 WNT5AP41221 380 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 NPBWR2P48146 333 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 HNRNPA3P51991 378 aaKnown RBP9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 ZNF133P52736 654 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 LCN6P62502 163 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 TLE1Q04724 770 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 MMDQ15546 238 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 LYZL2Q7Z4W2 148 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 TMEM123Q8N131 208 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 OR5AU1Q8NGC0 362 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 OR5C1Q8NGR4 320 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 TMEM171Q8WVE6 324 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 PECRQ9BY49 303 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 MANBALQ9NQG1 85 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 SLC35D1Q9NTN3 355 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 NECAP2Q9NVZ3 263 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 PAM16Q9Y3D7 125 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 RNF115Q9Y4L5 304 aa9.79□□□□□ -0.84
TRAPPC3-205ENST00000462715 FAM221AA4D161 298 aa9.78□□□□□ -0.84
TRAPPC3-205ENST00000462715 P2RY10O00398 339 aa9.78□□□□□ -0.84
TRAPPC3-205ENST00000462715 AQP7O14520 342 aa9.78□□□□□ -0.84
TRAPPC3-205ENST00000462715 CD55P08174 381 aa9.78□□□□□ -0.84
TRAPPC3-205ENST00000462715 IGLC2P0DOY2 106 aa9.78□□□□□ -0.84
TRAPPC3-205ENST00000462715 IGLC3P0DOY3 106 aa9.78□□□□□ -0.84
TRAPPC3-205ENST00000462715 ZNF823P16415 610 aa9.78□□□□□ -0.84
TRAPPC3-205ENST00000462715 CLDN18P56856 261 aa9.78□□□□□ -0.84
TRAPPC3-205ENST00000462715 SUMO1P63165 101 aaKnown RBP9.78□□□□□ -0.84
TRAPPC3-205ENST00000462715 Q0VG73 95 aa9.78□□□□□ -0.84
TRAPPC3-205ENST00000462715 OR52M1Q8NGK5 317 aa9.78□□□□□ -0.84
TRAPPC3-205ENST00000462715 SSC4DQ8WTU2 575 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms