RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 C9orf40Q8IXQ3 194 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 KLHDC1Q8N7A1 406 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 TMEM217Q8N7C4 229 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 RNF128Q8TEB7 428 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 DPF1Q92782 380 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 TMEM230Q96A57 120 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 PTX4Q96A99 478 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 UHRF2Q96PU4 802 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 PYGO2Q9BRQ0 406 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 AKIRIN1Q9H9L7 192 aaPredicted RBP5.02□□□□□ -1.61
CLK1-207ENST00000461981 Q9N2K0 584 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 OR51B2Q9Y5P1 312 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 HCFC1P51610 2035 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 SPTBN2O15020 2390 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 TRAV27A0A087WT01 109 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 FAM166BA8MTA8 275 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 F2Z2F3 143 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 ZG16O60844 167 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 SFT2D2O95562 160 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 HRASP01112 189 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 TIMP3P35625 211 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 C3AR1Q16581 482 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 SPATA31B1PQ5VZV4 182 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 COLCA1Q6ZS62 124 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 TCTEX1D1Q8N7M0 179 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 NFAM1Q8NET5 270 aaPredicted RBP5.02□□□□□ -1.61
CLK1-207ENST00000461981 OR6K6Q8NGW6 343 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 RND1Q92730 232 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 WDR34Q96EX3 536 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 C5orf30Q96GV9 206 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 TSSK2Q96PF2 358 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 IMMP2LQ96T52 175 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 NAA38Q9BRA0 125 aaKnown RBP5.02□□□□□ -1.61
CLK1-207ENST00000461981 C19orf24Q9BVV8 132 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 RBM24Q9BX46 236 aaKnown RBP5.02□□□□□ -1.61
CLK1-207ENST00000461981 C5orf66Q9H5L9 145 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 FNDC4Q9H6D8 234 aaPredicted RBP5.02□□□□□ -1.61
CLK1-207ENST00000461981 TMEM160Q9NX00 188 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 PHF3Q92576 2039 aaKnown RBP5.01□□□□□ -1.61
CLK1-207ENST00000461981 FASNP49327 2511 aaKnown RBP5.01□□□□□ -1.61
CLK1-207ENST00000461981 FAM230AA0A1W2PPH8 454 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 H0YGG7 62 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 FOXS1O43638 330 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 NUDT3O95989 172 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 KLK1P06870 262 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 IGLC1P0CG04 106 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 ADMP35318 185 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 CLDN17P56750 224 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 TAS2R31P59538 309 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 SUPT4H1P63272 117 aaKnown RBP5.01□□□□□ -1.61
CLK1-207ENST00000461981 IGLV3-21P80748 117 aaPredicted RBP5.01□□□□□ -1.61
CLK1-207ENST00000461981 GABRA6Q16445 453 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 BAGE3Q86Y29 109 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 BAGE2Q86Y30 109 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 ZNF595Q8IYB9 648 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 SIGLECL1Q8N7X8 197 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 OR4A5Q8NH83 315 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 PFN4Q8NHR9 129 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 RNASE6Q93091 150 aaKnown RBP5.01□□□□□ -1.61
CLK1-207ENST00000461981 PRAP1Q96NZ9 151 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 FAM110AQ9BQ89 295 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 SRSF8Q9BRL6 282 aaKnown RBP5.01□□□□□ -1.61
CLK1-207ENST00000461981 OR51I2Q9H344 312 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 CALHM2Q9HA72 323 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 MTCH1Q9NZJ7 389 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 PSG8Q9UQ74 426 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 TSSC4Q9Y5U2 329 aaPredicted RBP5.01□□□□□ -1.61
CLK1-207ENST00000461981 TNFRSF18Q9Y5U5 241 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 FER1L5A0AVI2 2057 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 TRGV8A0A0C4DH27 118 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 SDCBPO00560 298 aaPredicted RBP5.01□□□□□ -1.61
CLK1-207ENST00000461981 NPIPB7O75200 414 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 PMCHP20382 165 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 ATP6V0CP27449 155 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 CLDN15P56746 228 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 SCAND1P57086 179 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 LINC00310P59036 64 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 SYS1Q8N2H4 156 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 OR2L13Q8N349 312 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 Q8N976 141 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 OR2M3Q8NG83 312 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 DIO2Q92813 273 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 ZG16BQ96DA0 208 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 HARBI1Q96MB7 349 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 FOXN4Q96NZ1 517 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 SMIM7Q9BQ49 75 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 FAM173AQ9BQD7 235 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 NPVFQ9HCQ7 196 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 LYRM4Q9HD34 91 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 C20orf141Q9NUB4 165 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 JKAMPQ9P055 326 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 NAT8Q9UHE5 227 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 CDC42EP3Q9UKI2 254 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 TP53TG3Q9ULZ0 132 aa5.01□□□□□ -1.61
CLK1-207ENST00000461981 LRRC3CA6NJW4 275 aa5□□□□□ -1.61
CLK1-207ENST00000461981 PRR32B1ATL7 298 aa5□□□□□ -1.61
CLK1-207ENST00000461981 RHBDL1O75783 438 aa5□□□□□ -1.61
CLK1-207ENST00000461981 CELA3AP09093 270 aa5□□□□□ -1.61
CLK1-207ENST00000461981 PNMTP11086 282 aa5□□□□□ -1.61
CLK1-207ENST00000461981 ZNF43P17038 809 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms