RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 VKORC1L1Q8N0U8 176 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 ADAMTS20P59510 1910 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 KIAA1324LA8MWY0 1029 aaPredicted RBP10.13□□□□□ -0.79
SMPD4-213ENST00000454468 SYNGR2O43760 224 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 TAGLN2P37802 199 aaKnown RBP10.13□□□□□ -0.79
SMPD4-213ENST00000454468 GNG10P50151 68 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 FOXC1Q12948 553 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 GABRA6Q16445 453 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 CISD2Q8N5K1 135 aaKnown RBP10.13□□□□□ -0.79
SMPD4-213ENST00000454468 GLRX2Q9NS18 164 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 CACFD1Q9UGQ2 172 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 CBY1Q9Y3M2 126 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 A0A1W2PPH5 198 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 ZNF727A8MUV8 499 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 SPINT2O43291 252 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 FGF16O43320 207 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 NAPSAO96009 420 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 COX5BP10606 129 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 NDUFB7P17568 137 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 MST1LQ2TV78 715 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 Q6ZT83 130 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 DRAM1Q8N682 238 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 UBAC2Q8NBM4 344 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 M0R1X1 148 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 RAMP3O60896 148 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 GPR12P47775 334 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 FABP9Q0Z7S8 132 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 IL24Q13007 206 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 CATR1Q13166 79 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 ASCL4Q6XD76 172 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 BHLHA15Q7RTS1 189 aaPredicted RBP10.12□□□□□ -0.79
SMPD4-213ENST00000454468 OR51M1Q9H341 326 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 SMCO4Q9NRQ5 59 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 LIN7CQ9NUP9 197 aaKnown RBP10.12□□□□□ -0.79
SMPD4-213ENST00000454468 GFOD1Q9NXC2 390 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 ZDHHC8Q9ULC8 765 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 COL5A1P20908 1838 aaPredicted RBP10.12□□□□□ -0.79
SMPD4-213ENST00000454468 C7orf77A4D0Y5 90 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 MBP02144 154 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 PLA2G5P39877 138 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 KIR2DL2P43627 348 aaPredicted RBP10.12□□□□□ -0.79
SMPD4-213ENST00000454468 RPP30P78346 268 aaKnown RBP10.12□□□□□ -0.79
SMPD4-213ENST00000454468 Q6ZRM9 215 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 FGFRL1Q8N441 504 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 TMEM171Q8WVE6 324 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 PLA2G2EQ9NZK7 142 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 RALYQ9UKM9 306 aaKnown RBP10.12□□□□□ -0.79
SMPD4-213ENST00000454468 PTPRQQ9UMZ3 2332 aa10.12□□□□□ -0.79
SMPD4-213ENST00000454468 C12orf77C9JDV5 145 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 TMEM50AO95807 157 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 CCL8P80075 99 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 FAM27E3Q08E93 113 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 EIF2S3LQ2VIR3 472 aaKnown RBP10.11□□□□□ -0.79
SMPD4-213ENST00000454468 SMIM21Q3B7S5 101 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 INO80CQ6PI98 192 aaPredicted RBP10.11□□□□□ -0.79
SMPD4-213ENST00000454468 SEC11CQ9BY50 192 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 HEYLQ9NQ87 328 aaPredicted RBP10.11□□□□□ -0.79
SMPD4-213ENST00000454468 PARP11Q9NR21 331 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 SLC39A9Q9NUM3 307 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 KPTNQ9Y664 436 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 PTBP3O95758 552 aaKnown RBP10.11□□□□□ -0.79
SMPD4-213ENST00000454468 DEFA4P12838 97 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 NQO2P16083 231 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 UCP3P55916 312 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 PDZD11Q5EBL8 140 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 PRAMEF5Q5TYX0 476 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 SLC25A22Q9H936 323 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 CD55P08174 381 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 SEC11BP0C7V7 166 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 HBG1P69891 147 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 HBG2P69892 147 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 NRN1LQ496H8 165 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 ARL6IP6Q8N6S5 226 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 NECAP1Q8NC96 275 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 TAAR6Q96RI8 345 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 CXXC4Q9H2H0 198 aa10.11□□□□□ -0.79
SMPD4-213ENST00000454468 GAPDHP04406 335 aaKnown RBP10.1□□□□□ -0.79
SMPD4-213ENST00000454468 TLE4Q04727 773 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 MSMO1Q15800 293 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 Q8IYB0 196 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 EIF4E3Q8N5X7 224 aaKnown RBP10.1□□□□□ -0.79
SMPD4-213ENST00000454468 OR8G5Q8NG78 346 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 RPUSD4Q96CM3 377 aaKnown RBP10.1□□□□□ -0.79
SMPD4-213ENST00000454468 SMIM8Q96KF7 97 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 OR2V2Q96R30 315 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 A0A0U1RQK1 487 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 H0Y980 276 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 DANCRP0C864 163 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 S100A2P29034 98 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 IL15RAQ13261 267 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 C4orf17Q53FE4 359 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 ZNF787Q6DD87 383 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 OR13A1Q8NGR1 328 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 H1FXQ92522 213 aaKnown RBP10.1□□□□□ -0.79
SMPD4-213ENST00000454468 LHX4Q969G2 390 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 ZDHHC16Q969W1 377 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 TCAPO15273 167 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 MLNRO43193 412 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 S1PR2O95136 353 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 PCSK4Q6UW60 755 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms