RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 SLC35B1P78383 322 aa11.84□□□□□ -0.51
UBE2D3-210ENST00000453744 LBHQ53QV2 105 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-210ENST00000453744 NMSQ5H8A3 153 aa11.84□□□□□ -0.51
UBE2D3-210ENST00000453744 CYP2G1PQ6ZSU1 146 aa11.84□□□□□ -0.51
UBE2D3-210ENST00000453744 KMT5CQ86Y97 462 aa11.84□□□□□ -0.51
UBE2D3-210ENST00000453744 GPR35Q9HC97 309 aa11.84□□□□□ -0.51
UBE2D3-210ENST00000453744 CHCHD2Q9Y6H1 151 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-210ENST00000453744 hCG_38984A0A1B0GV85 526 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 A0A1W2PR77 199 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 HOXA6P31267 233 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 PTGDSP41222 190 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 NUTF2P61970 127 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 EDDM3AQ14507 147 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 TMEM54Q969K7 222 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 SIGLEC12Q96PQ1 595 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 WDR61Q9GZS3 305 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 CTXND1A0A1B0GTU2 59 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 CATR1Q13166 79 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 EXT1Q16394 746 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 PRSS8Q16651 343 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 SSX7Q7RTT5 188 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 TMEM256Q8N2U0 113 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 HSPB9Q9BQS6 159 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 OR2D2Q9H210 308 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 FGF12P61328 243 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 GNB2P62879 340 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 P2RX4Q99571 388 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 C2orf88Q9BSF0 95 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 MTCH1Q9NZJ7 389 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 TP53TG5Q9Y2B4 290 aa11.83□□□□□ -0.52
UBE2D3-210ENST00000453744 ABCA1O95477 2261 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 FGFRL1Q8N441 504 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 RPP25LQ8N5L8 163 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 ZNF552Q9H707 407 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 OBP2BQ9NPH6 170 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 A8MXE2 369 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 RPLP1P05386 114 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 CRISP2P16562 243 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 GZMHP20718 246 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 OR3A1P47881 315 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 ZNF573Q86YE8 665 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 MRPL37Q9BZE1 423 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 ZNF576Q9H609 170 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 PRUNE2Q8WUY3 3088 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 FCN1O00602 326 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 TCF21O43680 179 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 OR10J1P30954 320 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 PAX9P55771 341 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 TCL1AP56279 114 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 TPPP2P59282 170 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 SIGLECL1Q8N7X8 197 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 ZIC4Q8N9L1 334 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 SSC4DQ8WTU2 575 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 RIMS4Q9H426 269 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 MANBALQ9NQG1 85 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 NUP210LQ5VU65 1888 aa11.82□□□□□ -0.52
UBE2D3-210ENST00000453744 RNF212BA8MTL3 300 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 ZNF726P1Q15940 193 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 ANAPC16Q96DE5 110 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 ACY3Q96HD9 319 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 TMEM147Q9BVK8 224 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 DECR2Q9NUI1 292 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 TRIOO75962 3097 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 SZT2Q5T011 3432 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 CHD9Q3L8U1 2897 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 ZIC3O60481 467 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 ACTL6BO94805 426 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 CEACAM1P13688 526 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 RPL19P84098 196 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 TEX38Q6PEX7 206 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 TPRX1Q8N7U7 411 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 SNHG12Q9BXW3 62 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 PLEKHA3Q9HB20 300 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 CBY1Q9Y3M2 126 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 PI4KAP42356 2102 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 LRP5LA4QPB2 252 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 GALR2O43603 387 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 ZG16O60844 167 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 MGST1P10620 155 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 CCL4P13236 92 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 SELEP16581 610 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 CBLN1P23435 193 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 TFPI2P48307 235 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 TFF3Q07654 80 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 HIST3H3Q16695 136 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 RNF151Q2KHN1 245 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 LRRC75BQ2VPJ9 315 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 CRIP3Q6Q6R5 217 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 DTD1Q8TEA8 209 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 SSMEM1Q8WWF3 244 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 APOBEC3DQ96AK3 386 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 ZNF391Q9UJN7 358 aa11.81□□□□□ -0.52
UBE2D3-210ENST00000453744 CRYGSP22914 178 aa11.8□□□□□ -0.52
UBE2D3-210ENST00000453744 IER3P46695 156 aa11.8□□□□□ -0.52
UBE2D3-210ENST00000453744 GNG3P63215 75 aa11.8□□□□□ -0.52
UBE2D3-210ENST00000453744 SLC25A53Q5H9E4 307 aa11.8□□□□□ -0.52
UBE2D3-210ENST00000453744 CPEB3Q8NE35 698 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-210ENST00000453744 ZDHHC16Q969W1 377 aa11.8□□□□□ -0.52
UBE2D3-210ENST00000453744 ABHD14BQ96IU4 210 aa11.8□□□□□ -0.52
UBE2D3-210ENST00000453744 AQP7O14520 342 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms