RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 UBE2L6O14933 153 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 FAM78BQ5VT40 261 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 BPIFA4PQ86YQ2 179 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 FLVCR2Q9UPI3 526 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 hCG_38984A0A1B0GV85 526 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 ONECUT2O95948 504 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 HBZP02008 142 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 GPR61Q9BZJ8 451 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 UFC1Q9Y3C8 167 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 C1QL3Q5VWW1 255 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 OR4A47Q6IF82 309 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 OR10C1Q96KK4 312 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 NAT8BQ9UHF3 227 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 IGKV1-8A0A0C4DH67 115 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 PITX3O75364 302 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 NEURL1O76050 574 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 STAG3L2P0CL84 134 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 CCKARP32238 428 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 B2MP61769 119 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 FAAP20Q6NZ36 180 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 OR4X2Q8NGF9 303 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 GALNT14Q96FL9 552 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 CEACAM18A8MTB9 384 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 CLLU1Q5K131 121 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 NSUN5P2Q63ZY6 315 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 KLF14Q8TD94 323 aaPredicted RBP7.39□□□□□ -1.23
PTPN3-204ENST00000446349 LINC00052Q96N35 136 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 CCL13Q99616 98 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 ALX3O95076 343 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 C8orf82Q6P1X6 216 aaPredicted RBP7.39□□□□□ -1.23
PTPN3-204ENST00000446349 TMEM116Q8NCL8 245 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 MYOZ3Q8TDC0 251 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 NRIP2Q9BQI9 281 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 ELOA3CA0A087WX78 387 aaPredicted RBP7.38□□□□□ -1.23
PTPN3-204ENST00000446349 UQCRFS1P47985 274 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 HIST1H3AP68431 136 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 RAB32Q13637 225 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 C20orf204Q6ZNR8 217 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 CALYQ9NYX4 217 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 FBLL1A6NHQ2 334 aaKnown RBP7.38□□□□□ -1.23
PTPN3-204ENST00000446349 SOCS1O15524 211 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 PSG5Q15238 335 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 C19orf48Q6RUI8 117 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 GBGT1Q8N5D6 347 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 ZNF703Q9H7S9 590 aaPredicted RBP7.38□□□□□ -1.23
PTPN3-204ENST00000446349 SNRNP200O75643 2136 aaKnown RBP7.38□□□□□ -1.23
PTPN3-204ENST00000446349 IGKV3-11P04433 115 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 ZNF385CQ66K41 422 aaPredicted RBP7.38□□□□□ -1.23
PTPN3-204ENST00000446349 OR10G8Q8NGN5 311 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 CHODLQ9H9P2 273 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 CLEC5AQ9NY25 188 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 IGHV3OR15-7A0A075B7D8 119 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 CADM3Q8N126 398 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 SSBP3Q9BWW4 388 aaPredicted RBP7.38□□□□□ -1.23
PTPN3-204ENST00000446349 TMPRSS13Q9BYE2 586 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 PARP12Q9H0J9 701 aaKnown RBP7.38□□□□□ -1.23
PTPN3-204ENST00000446349 SIRT7Q9NRC8 400 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 PPP1R17O96001 155 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 PLAC9Q5JTB6 97 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 UNQ5815/PRO19632Q6UWF5 114 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 NECAP1Q8NC96 275 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 SCMH1Q96GD3 660 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 PAXXQ9BUH6 204 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 LIMS1P48059 325 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 CLDN18P56856 261 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 NHLH1Q02575 133 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 NHLH2Q02577 135 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 TUSC1Q2TAM9 212 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 ZNF343Q6P1L6 599 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 PQLC2Q6ZP29 291 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 TIMP4Q99727 224 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 QTRT1Q9BXR0 403 aaKnown RBP7.38□□□□□ -1.23
PTPN3-204ENST00000446349 PRSS50Q9UI38 385 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 IGLV3-12A0A075B6K2 115 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 TTRP02766 147 aa7.38□□□□□ -1.23
PTPN3-204ENST00000446349 LSM10Q969L4 123 aaKnown RBP7.38□□□□□ -1.23
PTPN3-204ENST00000446349 NPIPB11E5RHQ5 1161 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 PAPPA-AS1Q5QFB9 102 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 NPFFR1Q9GZQ6 430 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 PEMTQ9UBM1 199 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 C11orf94C9JXX5 98 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 MFNGO00587 321 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 OR2H2O95918 312 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 PDCD1Q15116 288 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 GUCA2BQ16661 112 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 SPANXN1Q5VSR9 72 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 BVESQ8NE79 360 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 MRGPRFQ96AM1 343 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 CNOT1A5YKK6 2376 aaKnown RBP7.37□□□□□ -1.23
PTPN3-204ENST00000446349 FCGR3AP08637 254 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 PIGYQ3MUY2 71 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 CCL28Q9NRJ3 127 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 A0A1W2PRD5 423 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 A0A1W2PRF3 423 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 A0A1W2PRM7 423 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 KIAA1324LA8MWY0 1029 aaPredicted RBP7.37□□□□□ -1.23
PTPN3-204ENST00000446349 IGKV1D-16P01601 117 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 SCGB1C2P0DMR2 95 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 TEX261Q6UWH6 196 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 TMEM52Q8NDY8 209 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms