RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 LINC00862A6NCI5 91 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 IQCF6A8MYZ5 107 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 PPIAL4DF5H284 164 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 HOXD4P09016 255 aaPredicted RBP8.96□□□□□ -0.98
CALD1-210ENST00000443197 PPIAL4FP0DN26 164 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 HKR1P10072 659 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 RPL35P42766 123 aaKnown RBP8.96□□□□□ -0.98
CALD1-210ENST00000443197 GUK1Q16774 197 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 AVPI1Q5T686 147 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 DRAM1Q8N682 238 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 TMEM252Q8N6L7 170 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 POC1AQ8NBT0 407 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 OR13A1Q8NGR1 328 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 SPSB4Q96A44 273 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 PPIAL4AQ9Y536 164 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 H0YIZ8 118 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 CD8AP01732 235 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 IGHG3P01860 377 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 RPS2P15880 293 aaKnown RBP8.96□□□□□ -0.98
CALD1-210ENST00000443197 SUPT4H1P63272 117 aaKnown RBP8.96□□□□□ -0.98
CALD1-210ENST00000443197 LY6DQ14210 128 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 ARSJQ5FYB0 599 aaPredicted RBP8.96□□□□□ -0.98
CALD1-210ENST00000443197 ZNF787Q6DD87 383 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 DHRS11Q6UWP2 260 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 SELENOHQ8IZQ5 122 aaKnown RBP8.96□□□□□ -0.98
CALD1-210ENST00000443197 C22orf15Q8WYQ4 148 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 MEGF10Q96KG7 1140 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 ARV1Q9H2C2 271 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 PLSCR4Q9NRQ2 329 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 ATG2AQ2TAZ0 1938 aa8.96□□□□□ -0.98
CALD1-210ENST00000443197 ANKHD1Q8IWZ3 2542 aaKnown RBP8.96□□□□□ -0.98
CALD1-210ENST00000443197 RNF222A6NCQ9 220 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 SELLP14151 372 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 IL3RAP26951 378 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 FHITP49789 147 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 UBE2G2P60604 165 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 Q6ZS92 163 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 FAM216BQ8N7L0 139 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 BVESQ8NE79 360 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 C1orf162Q8NEQ5 155 aaPredicted RBP8.95□□□□□ -0.98
CALD1-210ENST00000443197 MSI2Q96DH6 328 aaKnown RBP8.95□□□□□ -0.98
CALD1-210ENST00000443197 LPAR3Q9UBY5 353 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 WDFY4Q6ZS81 3184 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 RPS10-NUDT3A0A1W2PQS6 291 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 PSPNO60542 156 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 MT-CO2P00403 227 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 SFTA3P0C7M3 94 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 PGA5P0DJD9 388 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 DEFA4P12838 97 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 RPS10P46783 165 aaKnown RBP8.95□□□□□ -0.98
CALD1-210ENST00000443197 NHLRC3Q5JS37 347 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 ZFP82Q8N141 532 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 DTD1Q8TEA8 209 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 RPUSD4Q96CM3 377 aaKnown RBP8.95□□□□□ -0.98
CALD1-210ENST00000443197 NTNG2Q96CW9 530 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 CIB3Q96Q77 187 aaPredicted RBP8.95□□□□□ -0.98
CALD1-210ENST00000443197 NIPSNAP3BQ9BS92 247 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 MRPL37Q9BZE1 423 aaKnown RBP8.95□□□□□ -0.98
CALD1-210ENST00000443197 IGHV3-72A0A0B4J1Y9 119 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 ATP6V0CP27449 155 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 PRB3Q04118 309 aaPredicted RBP8.95□□□□□ -0.98
CALD1-210ENST00000443197 CLEC12BQ2HXU8 276 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 WDR82Q6UXN9 313 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 ETV3LQ6ZN32 361 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 OR10Z1Q8NGY1 313 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 C14orf79Q96F83 325 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 ACY3Q96HD9 319 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 GAL3ST2Q9H3Q3 398 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 SLC35D1Q9NTN3 355 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 UQCC1Q9NVA1 299 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 RPH3ALQ9UNE2 315 aa8.95□□□□□ -0.98
CALD1-210ENST00000443197 H0Y980 276 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 J3QW42 95 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 DLL1O00548 723 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 SCAF4O95104 1147 aaKnown RBP8.94□□□□□ -0.98
CALD1-210ENST00000443197 ADH4P08319 380 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 TAGLN2P37802 199 aaKnown RBP8.94□□□□□ -0.98
CALD1-210ENST00000443197 TAS2R30P59541 319 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 TRAT1Q6PIZ9 186 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 ZNF474Q6S9Z5 364 aaPredicted RBP8.94□□□□□ -0.98
CALD1-210ENST00000443197 RBMXL3Q8N7X1 1067 aaKnown RBP8.94□□□□□ -0.98
CALD1-210ENST00000443197 ZNF355PQ9NSJ1 428 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 DOCK11Q5JSL3 2073 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 ADIRFQ15847 76 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 DOLPP1Q86YN1 238 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 SNX22Q96L94 193 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 OR5B12Q96R08 314 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 RNF126Q9BV68 326 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 SLC25A22Q9H936 323 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 SLC25A6P12236 298 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 NAT1P18440 290 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 TBR1Q16650 682 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 RBMS3Q6XE24 437 aaKnown RBP8.94□□□□□ -0.98
CALD1-210ENST00000443197 UBAC2Q8NBM4 344 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 MMP26Q9NRE1 261 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 A0A1W2PPH5 198 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 C1orf196B1AJZ1 125 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 CYB5BO43169 146 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 S1PR2O95136 353 aa8.94□□□□□ -0.98
CALD1-210ENST00000443197 ZP3P21754 424 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms