RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 GAPDHP04406 335 aaKnown RBP12.85□□□□□ -0.35
USP39-205ENST00000442708 SAA2P0DJI9 122 aaPredicted RBP12.85□□□□□ -0.35
USP39-205ENST00000442708 IL3RAP26951 378 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 PRSS3P35030 304 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 RAB7AP51149 207 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 RPL39P5Q59GN2 51 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 CCDC144NLQ6NUI1 221 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 H1FOOQ8IZA3 346 aaPredicted RBP12.85□□□□□ -0.35
USP39-205ENST00000442708 OR56B4Q8NH76 319 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 OR10J5Q8NHC4 309 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 MCFD2Q8NI22 146 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 GPX8Q8TED1 209 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 DGCR14Q96DF8 476 aaKnown RBP12.85□□□□□ -0.35
USP39-205ENST00000442708 ABHD1Q96SE0 405 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 ABCB10Q9NRK6 738 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 C1RLQ9NZP8 487 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 RNF150Q9ULK6 438 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 ZNF736B4DX44 427 aaPredicted RBP12.84□□□□□ -0.35
USP39-205ENST00000442708 LANCL1O43813 399 aa12.84□□□□□ -0.35
USP39-205ENST00000442708 CBX5P45973 191 aa12.84□□□□□ -0.35
USP39-205ENST00000442708 HABP2Q14520 560 aaPredicted RBP12.84□□□□□ -0.35
USP39-205ENST00000442708 ZNF833PQ6ZTB9 187 aa12.84□□□□□ -0.35
USP39-205ENST00000442708 MOB3BQ86TA1 216 aa12.84□□□□□ -0.35
USP39-205ENST00000442708 OR8H3Q8N146 312 aa12.84□□□□□ -0.35
USP39-205ENST00000442708 C5orf30Q96GV9 206 aa12.84□□□□□ -0.35
USP39-205ENST00000442708 MRPL20Q9BYC9 149 aaKnown RBP12.84□□□□□ -0.35
USP39-205ENST00000442708 ADAM30Q9UKF2 790 aa12.84□□□□□ -0.35
USP39-205ENST00000442708 LPLP06858 475 aa12.83□□□□□ -0.36
USP39-205ENST00000442708 SNRNP70P08621 437 aaKnown RBP12.83□□□□□ -0.36
USP39-205ENST00000442708 HKR1P10072 659 aa12.83□□□□□ -0.36
USP39-205ENST00000442708 NAT1P18440 290 aa12.83□□□□□ -0.36
USP39-205ENST00000442708 NFYAP23511 347 aaPredicted RBP12.83□□□□□ -0.36
USP39-205ENST00000442708 BRS3P32247 399 aa12.83□□□□□ -0.36
USP39-205ENST00000442708 TNFSF8P32971 234 aa12.83□□□□□ -0.36
USP39-205ENST00000442708 RNASE12Q5GAN4 147 aaKnown RBP12.83□□□□□ -0.36
USP39-205ENST00000442708 TGIF2LXQ8IUE1 241 aa12.83□□□□□ -0.36
USP39-205ENST00000442708 LYSMD2Q8IV50 215 aa12.83□□□□□ -0.36
USP39-205ENST00000442708 CAPSLQ8WWF8 208 aa12.83□□□□□ -0.36
USP39-205ENST00000442708 EDARADDQ8WWZ3 215 aa12.83□□□□□ -0.36
USP39-205ENST00000442708 GINS4Q9BRT9 223 aa12.83□□□□□ -0.36
USP39-205ENST00000442708 IFT46Q9NQC8 304 aa12.83□□□□□ -0.36
USP39-205ENST00000442708 NDUFA13Q9P0J0 144 aa12.83□□□□□ -0.36
USP39-205ENST00000442708 TMEM89A2RUT3 159 aa12.82□□□□□ -0.36
USP39-205ENST00000442708 RAB29O14966 203 aa12.82□□□□□ -0.36
USP39-205ENST00000442708 OR8U9P0C7N5 309 aa12.82□□□□□ -0.36
USP39-205ENST00000442708 LINC00205P59089 165 aa12.82□□□□□ -0.36
USP39-205ENST00000442708 ACTG1P63261 375 aa12.82□□□□□ -0.36
USP39-205ENST00000442708 THNSL2Q86YJ6 484 aa12.82□□□□□ -0.36
USP39-205ENST00000442708 OR8U1Q8NH10 309 aa12.82□□□□□ -0.36
USP39-205ENST00000442708 OR52I2Q8NH67 350 aa12.82□□□□□ -0.36
USP39-205ENST00000442708 NABP2Q9BQ15 211 aa12.82□□□□□ -0.36
USP39-205ENST00000442708 SCPEP1Q9HB40 452 aa12.82□□□□□ -0.36
USP39-205ENST00000442708 STAB1Q9NY15 2570 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 IGKV1D-13A0A0B4J2D9 117 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 A6NHS1 94 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 J3QRK9 145 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 TUSC2O75896 110 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 TPPPO94811 219 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 CTXN2P0C2S0 81 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 IGKV1-13P0DP09 117 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 ARHGDIBP52566 201 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 ARPC4P59998 168 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 LSAMPQ13449 338 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 DHRS7BQ6IAN0 325 aaPredicted RBP12.81□□□□□ -0.36
USP39-205ENST00000442708 Q6ZSV7 163 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 OR5AP2Q8NGF4 316 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 DIRAS2Q96HU8 199 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 SOSTQ9BQB4 213 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 OR2D2Q9H210 308 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 PIPOXQ9P0Z9 390 aa12.81□□□□□ -0.36
USP39-205ENST00000442708 SULT1C2O00338 296 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 IGKV1D-33P01593 117 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 IGKV1-33P01594 117 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 CT45A6P0DMU7 189 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 CT45A5P0DMU8 189 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 CT45A7P0DMV0 189 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 OR5H8P0DN80 308 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 CD1BP29016 333 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 GPR12P47775 334 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 RFX2P48378 723 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 RPL15P61313 204 aaKnown RBP12.8□□□□□ -0.36
USP39-205ENST00000442708 DGCR2P98153 550 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 EBI3Q14213 229 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 HNF4GQ14541 408 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 CDK10Q15131 360 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 FAM71F2Q6NXP2 309 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 GLDNQ6ZMI3 551 aaPredicted RBP12.8□□□□□ -0.36
USP39-205ENST00000442708 LIAT1Q6ZQX7 453 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 Q8N6K4 173 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 DRAXINQ8NBI3 349 aaPredicted RBP12.8□□□□□ -0.36
USP39-205ENST00000442708 SPATA3Q8NHX4 192 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 RBM14Q96PK6 669 aaKnown RBP12.8□□□□□ -0.36
USP39-205ENST00000442708 MMP27Q9H306 513 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 KLK11Q9UBX7 282 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 PITPNC1Q9UKF7 332 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 A3GALT2U3KPV4 340 aa12.8□□□□□ -0.36
USP39-205ENST00000442708 TXNL1O43396 289 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 NDUFA7O95182 113 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 PMP2P02689 132 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 AMY1AP04745 511 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms