RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 C2orf88Q9BSF0 95 aa5.84□□□□□ -1.48
USP46-201ENST00000441222 IGHV1OR15-9A0A0B4J2B8 117 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 FAM90A26D6RGX4 464 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 H0Y980 276 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 SOCS1O15524 211 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 ADAP1O75689 374 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 PRSS2P07478 247 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 MMP16P51512 607 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 AESQ08117 197 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 SPEM2Q0P670 501 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 IBA57Q5T440 356 aaKnown RBP5.83□□□□□ -1.48
USP46-201ENST00000441222 DNM1P46Q6ZS02 220 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 TIMP4Q99727 224 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.83□□□□□ -1.483e-6■■■■□ 23.4
USP46-201ENST00000441222 GBF1Q92538 1859 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 LNP1A1A4G5 178 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 CXorf65A6NEN9 183 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 BCL2P10415 239 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 RELQ04864 619 aaPredicted RBP5.83□□□□□ -1.48
USP46-201ENST00000441222 TMEM136Q6ZRR5 245 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 PTPMT1Q8WUK0 201 aaPredicted RBP5.83□□□□□ -1.48
USP46-201ENST00000441222 RAX2Q96IS3 184 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 HSPB7Q9UBY9 170 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 ZNF236Q9UL36 1845 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 HEATR5AQ86XA9 2040 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 A0A1W2PR80 420 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 LEPROTL1O95214 131 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 MFAP4P55083 255 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 KIAA0040Q15053 153 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 VAX1Q5SQQ9 334 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 C10orf128Q5T292 105 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 ALKBH7Q9BT30 221 aaPredicted RBP5.83□□□□□ -1.48
USP46-201ENST00000441222 TNFRSF19Q9NS68 423 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 LINC00862A6NCI5 91 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 H7C1H1 209 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 SNRPD3P62318 126 aaKnown RBP5.83□□□□□ -1.48
USP46-201ENST00000441222 DNLZQ5SXM8 178 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 SPNS2Q8IVW8 549 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 LPAR2Q9HBW0 351 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 JKAMPQ9P055 326 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 ANK1P16157 1881 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 AHRRA9YTQ3 701 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 J3KRW8 73 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 CCL2P13500 99 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 CTGFP29279 349 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 TSPAN7P41732 249 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 SELENOPP49908 381 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 WFDC3Q8IUB2 231 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 ZNF645Q8N7E2 425 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 TMEM45BQ96B21 275 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 FAM206AQ9NX38 181 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 PXMP4Q9Y6I8 212 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 MGST3O14880 152 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 HLA-DRB1P01911 266 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 HOGA1Q86XE5 327 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 PRDM14Q9GZV8 571 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 TNFRSF12AQ9NP84 129 aa5.83□□□□□ -1.48
USP46-201ENST00000441222 RNF224P0DH78 156 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 GPR6P46095 362 aaPredicted RBP5.82□□□□□ -1.48
USP46-201ENST00000441222 NXPH1P58417 271 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 NUTF2P61970 127 aaKnown RBP5.82□□□□□ -1.48
USP46-201ENST00000441222 TSPO2Q5TGU0 170 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 THSD4Q6ZMP0 1018 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 GUCD1Q96NT3 240 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 CCL28Q9NRJ3 127 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 NKX2-6A6NCS4 301 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 FBLL1A6NHQ2 334 aaKnown RBP5.82□□□□□ -1.48
USP46-201ENST00000441222 LEUTXA8MZ59 168 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 IGHV3-13P01766 116 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 IGHV3-7P01780 117 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 CD74P04233 296 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 ADAMTS17Q8TE56 1095 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 ZNF71Q9NQZ8 489 aaPredicted RBP5.82□□□□□ -1.48
USP46-201ENST00000441222 C9orf172C9J069 976 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 CD1AP06126 327 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 RNASE1P07998 156 aaKnown RBP5.82□□□□□ -1.48
USP46-201ENST00000441222 WNT5AP41221 380 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 RPL8P62917 257 aaKnown RBP5.82□□□□□ -1.48
USP46-201ENST00000441222 NCMAPQ5T1S8 102 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 PCGF1Q9BSM1 259 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 DLL1O00548 723 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 CCL21O00585 134 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 HSPB1P04792 205 aaKnown RBP5.82□□□□□ -1.48
USP46-201ENST00000441222 ATP6V0CP27449 155 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 FGF12P61328 243 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 RPS4XP62701 263 aaKnown RBP5.82□□□□□ -1.48
USP46-201ENST00000441222 SMUG1Q53HV7 270 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 MESTQ5EB52 335 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 LINC01555Q8NAE3 123 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 OR10AC1Q8NH08 325 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 FAM90A10PA6NDY2 464 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 FAM90A18PA6NE21 464 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 FAM90A16PA6NEW6 464 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 FAM90A20PA6NIJ5 464 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 FAM90A8PA6NJQ4 464 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 FAM90A7PA6NKC0 464 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 FAM90A22PA8MWA6 464 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 FAM90A12PA8MX19 464 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 FAM90A5PA8MXJ8 464 aa5.82□□□□□ -1.48
USP46-201ENST00000441222 FAM90A23PA8MXZ1 464 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms