RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 RPL15P61313 204 aaKnown RBP10.13□□□□□ -0.79
LTBR-203ENST00000441074 ARL16Q0P5N6 197 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 TMEM42Q69YG0 159 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 OR2Y1Q8NGV0 311 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 OR2AE1Q8NHA4 323 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 MRPL30Q8TCC3 161 aaKnown RBP10.13□□□□□ -0.79
LTBR-203ENST00000441074 DIRC2Q96SL1 478 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 A0A0G2JRQ6 117 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 LILRA1O75019 489 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 VENTXO95231 258 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 LCATP04180 440 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 HBG1P69891 147 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 HBG2P69892 147 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 PHYHD1Q5SRE7 291 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 TMEM256Q8N2U0 113 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 ZNF385AQ96PM9 386 aaKnown RBP10.12□□□□□ -0.79
LTBR-203ENST00000441074 WDR61Q9GZS3 305 aaKnown RBP10.12□□□□□ -0.79
LTBR-203ENST00000441074 WDR54Q9H977 334 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 GPR35Q9HC97 309 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 CCL28Q9NRJ3 127 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 YPEL1O60688 119 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 PGLYRP1O75594 196 aaPredicted RBP10.12□□□□□ -0.79
LTBR-203ENST00000441074 WNT5AP41221 380 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 FUT6P51993 359 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 UBE2NP61088 152 aaKnown RBP10.12□□□□□ -0.79
LTBR-203ENST00000441074 RANP62826 216 aaKnown RBP10.12□□□□□ -0.79
LTBR-203ENST00000441074 Q0VFX4 171 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 DMRTA1Q5VZB9 504 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 TEX43Q6ZNM6 134 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 DTD1Q8TEA8 209 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 CT55Q8WUE5 264 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 IMMP1LQ96LU5 166 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 YPEL2Q96QA6 119 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 PSENENQ9NZ42 101 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 ZNF391Q9UJN7 358 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 TRAPPC1Q9Y5R8 145 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 PXMP4Q9Y6I8 212 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 MGAQ8IWI9 3026 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 AKAP13Q12802 2813 aa10.12□□□□□ -0.79
LTBR-203ENST00000441074 OR7C1O76099 320 aaPredicted RBP10.11□□□□□ -0.79
LTBR-203ENST00000441074 IL6RP08887 468 aaPredicted RBP10.11□□□□□ -0.79
LTBR-203ENST00000441074 FTH1P19P0C7X4 201 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 CRYGSP22914 178 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 F2RP25116 425 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 IL3RAP26951 378 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 DAZAP2Q15038 168 aaPredicted RBP10.11□□□□□ -0.79
LTBR-203ENST00000441074 HES3Q5TGS1 186 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 HAPLN4Q86UW8 402 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 RPP25LQ8N5L8 163 aaKnown RBP10.11□□□□□ -0.79
LTBR-203ENST00000441074 EXTL1Q92935 676 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 SDSLQ96GA7 329 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 WDYHV1Q96HA8 205 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 ULBP2Q9BZM5 246 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 OR2J1Q9GZK6 312 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 CHCHD2Q9Y6H1 151 aaPredicted RBP10.11□□□□□ -0.79
LTBR-203ENST00000441074 DMXL2Q8TDJ6 3036 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 SYNGR2O43760 224 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 NUPR1O60356 82 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 MT-CO3P00414 261 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 SCTP09683 121 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 SELEP16581 610 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 FOLR3P41439 243 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 FAM27BQ5VT28 67 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 FAM180AQ6UWF9 173 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 C6orf15Q6UXA7 325 aaPredicted RBP10.11□□□□□ -0.79
LTBR-203ENST00000441074 TAF15Q92804 592 aaKnown RBP eCLIP10.11□□□□□ -0.79
LTBR-203ENST00000441074 OR4C12Q96R67 309 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 RBM24Q9BX46 236 aaKnown RBP10.11□□□□□ -0.79
LTBR-203ENST00000441074 MANBALQ9NQG1 85 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 TMEM106BQ9NUM4 274 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 TIMM9Q9Y5J7 89 aa10.11□□□□□ -0.79
LTBR-203ENST00000441074 CTXN2P0C2S0 81 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 S100GP29377 79 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 TESK1Q15569 626 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 TMEM144Q7Z5S9 345 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 OR4F5Q8NH21 305 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 OR4F4Q96R69 305 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 DLL3Q9NYJ7 618 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 LOC102723996A0A087X1L8 192 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 FAM90A10PA6NDY2 464 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 FAM90A18PA6NE21 464 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 FAM90A16PA6NEW6 464 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 FAM90A20PA6NIJ5 464 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 FAM90A8PA6NJQ4 464 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 FAM90A7PA6NKC0 464 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 FAM90A22PA8MWA6 464 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 FAM90A12PA8MX19 464 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 FAM90A5PA8MXJ8 464 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 FAM90A23PA8MXZ1 464 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 NAPSAO96009 420 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 IGKV1D-33P01593 117 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 IGKV1-33P01594 117 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 FAM90A15PP0C7V4 464 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 FAM90A13PP0C7W8 464 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 FAM90A14PP0C7W9 464 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 FAM90A24PP0C7X0 464 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 CCL3P10147 92 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 IAPPP10997 89 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 CD99P14209 185 aa10.1□□□□□ -0.79
LTBR-203ENST00000441074 CD82P27701 267 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms