RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 EFCAB1Q9HAE3 211 aa1.39□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZC4H2Q9NQZ6 224 aa1.39□□□□□ -2.19
HMGB1P18-201ENST00000438801 C8orf4Q9NR00 106 aa1.39□□□□□ -2.19
HMGB1P18-201ENST00000438801 FBXO6Q9NRD1 293 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P18-201ENST00000438801 HRASLS2Q9NWW9 162 aa1.39□□□□□ -2.19
HMGB1P18-201ENST00000438801 TAS2R13Q9NYV9 303 aa1.39□□□□□ -2.19
HMGB1P18-201ENST00000438801 MRM2Q9UI43 246 aaKnown RBP1.39□□□□□ -2.19
HMGB1P18-201ENST00000438801 ATPIF1Q9UII2 106 aa1.39□□□□□ -2.19
HMGB1P18-201ENST00000438801 POMPQ9Y244 141 aa1.39□□□□□ -2.19
HMGB1P18-201ENST00000438801 SLC17A4Q9Y2C5 497 aa1.39□□□□□ -2.19
HMGB1P18-201ENST00000438801 AP3M1Q9Y2T2 418 aa1.39□□□□□ -2.19
HMGB1P18-201ENST00000438801 NDUFAF1Q9Y375 327 aa1.39□□□□□ -2.19
HMGB1P18-201ENST00000438801 RPL36Q9Y3U8 105 aaKnown RBP1.39□□□□□ -2.19
HMGB1P18-201ENST00000438801 TCRBV3S1A0A5B6 114 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 TSPAN11A1L157 253 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 A8MT66 165 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 BBIP1A8MTZ0 92 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 C2orf74A8MZ97 194 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 LOC110117498-PIK3R3F6TDL0 507 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 TEX46H3BTG2 121 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 K7N7A8 449 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 PSMD12O00232 456 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 FCN1O00602 326 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 PLPP3O14495 311 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 TOR1AO14656 332 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 AIM2O14862 343 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 AZIN1O14977 448 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 UBDO15205 165 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 EIF4E2O60573 245 aaKnown RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 SMIM24O75264 130 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 ENTPD5O75356 428 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 NDUFS6O75380 124 aaKnown RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 ATP5LO75964 103 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR7A10O76100 309 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 AQP8O94778 261 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 RPP14O95059 124 aaKnown RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 NDUFB2O95178 105 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR5F1O95221 314 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 IFNA10P01566 189 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 P04436 131 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 RPS17P08708 135 aaKnown RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 MPC1LP0DKB6 136 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 P0DMU3 169 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 FAM231AP0DMU4 169 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 FAM231CP0DMU5 169 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 PSKH1P11801 424 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 IDO1P14902 403 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF250P15622 560 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF7P17097 686 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 CTRB1P17538 263 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 IL1RNP18510 177 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 TCN1P20061 433 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 NPR2P20594 1047 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 ME2P23368 584 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 AQP1P29972 269 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 KDELR2P33947 212 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 AQP2P41181 271 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 PTGDSP41222 190 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 GLP1RP43220 463 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 GPR1P46091 355 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 DNASE1L1P49184 302 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 CDC34P49427 236 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 LHX2P50458 406 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 IDH3GP51553 393 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 SSR4P51571 173 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 GTF2A1P52655 376 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 CDKN2DP55273 166 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 LIM2P55344 173 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 AP1S2P56377 157 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 FBXW4P57775 412 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR2B6P58173 313 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 MAXP61244 160 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 MRPS22P82650 360 aaKnown RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 EMX2Q04743 252 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 PSG5Q15238 335 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 TNXAQ16473 311 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 DUSP7Q16829 419 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 SLC36A2Q495M3 483 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 PYCR3Q53H96 274 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 CARD16Q5EG05 197 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 OGFRL1Q5TC84 451 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 CTRB2Q6GPI1 263 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 FAM71E1Q6IPT2 247 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 C1orf94Q6P1W5 598 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 C22orf39Q6P5X5 142 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 SBSNQ6UWP8 590 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZCCHC23Q6ZST2 131 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 ACOT7LQ6ZUV0 252 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR2W3Q7Z3T1 314 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF546Q86UE3 836 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 FUNDC1Q8IVP5 155 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 UBE2DNLQ8IWF7 75 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 FTMTQ8N4E7 242 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 TMEM156Q8N614 296 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 PACRGLQ8N7B6 248 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF738Q8NE65 137 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR4K2Q8NGD2 314 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR6N2Q8NGY6 317 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR5K2Q8NHB8 316 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 CDC26Q8NHZ8 85 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms