RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ADCYAP1P18509 176 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 GZMHP20718 246 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 IL3RAP26951 378 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 SUMO1P63165 101 aaKnown RBP5.73□□□□□ -1.49
CSDE1-205ENST00000438362 DCAF10Q5QP82 559 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 MRPL14Q6P1L8 145 aaKnown RBP5.73□□□□□ -1.49
CSDE1-205ENST00000438362 TMEM251Q8N6I4 163 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 LRTM2Q8N967 370 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 OR5B3Q8NH48 314 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 OR4S2Q8NH73 311 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 CMTM2Q8TAZ6 248 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 ZNF524Q96C55 264 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 IMMP1LQ96LU5 166 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 PSMG3Q9BT73 122 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-205ENST00000438362 AURKAIP1Q9NWT8 199 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-205ENST00000438362 OR1A1Q9P1Q5 309 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 TRAV17A0A0B4J275 112 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 TMEM210A6NLX4 147 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 C21orf140B9A014 251 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 K7N7A8 449 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 RFPL3SP0C7P2 107 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 CRISP2P16562 243 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 GNG4P50150 75 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 SLC23A3Q6PIS1 610 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 TMEM56Q96MV1 263 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 DMRTA2Q96SC8 542 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 EGLN1Q9GZT9 426 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 DECR2Q9NUI1 292 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 FKBP11Q9NYL4 201 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 TMEM56-RWDD3S4R434 201 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 KIAA1324LA8MWY0 1029 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-205ENST00000438362 SPINK4O60575 86 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 HSBP1O75506 76 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 ADH4P08319 380 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 OR10J4P0C629 311 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 KIR2DS2P43631 304 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 CNN1P51911 297 aaKnown RBP5.72□□□□□ -1.49
CSDE1-205ENST00000438362 BPIFB3P59826 476 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 SSMEM1Q8WWF3 244 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 ACY3Q96HD9 319 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 RCC1LQ96I51 464 aaKnown RBP5.72□□□□□ -1.49
CSDE1-205ENST00000438362 RBKSQ9H477 322 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 GLRX2Q9NS18 164 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 TREM2Q9NZC2 230 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 OR6C3Q9NZP0 311 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 CNOT1A5YKK6 2376 aaKnown RBP5.72□□□□□ -1.49
CSDE1-205ENST00000438362 ICE1Q9Y2F5 2266 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 A0A087WWC5 75 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 CEACAM18A8MTB9 384 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 ST8SIA5O15466 376 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 MMP7P09237 267 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-205ENST00000438362 FOLR2P14207 255 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 HOXA5P20719 270 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 G0S2P27469 103 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 TNFRSF9Q07011 255 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 GABRA6Q16445 453 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 WDR25Q64LD2 544 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-205ENST00000438362 S100A7AQ86SG5 101 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 C1orf210Q8IVY1 113 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 OR10X1Q8NGY0 326 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 SGMS2Q8NHU3 365 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 RAB24Q969Q5 203 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 BSCL2Q96G97 398 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-205ENST00000438362 PCGF1Q9BSM1 259 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 CHRDL1Q9BU40 450 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 ABHD14AQ9BUJ0 271 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 C1QTNF5Q9BXJ0 243 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 ZNF552Q9H707 407 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-205ENST00000438362 BARX1Q9HBU1 254 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-205ENST00000438362 WFDC1Q9HC57 220 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 NGBQ9NPG2 151 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 PNRC2Q9NPJ4 139 aaKnown RBP5.72□□□□□ -1.49
CSDE1-205ENST00000438362 C5orf63A6NC05 138 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 SHISA7A6NL88 538 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 M0R143 59 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 UBE2CO00762 179 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 COX7A2P2O60397 106 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 HBZP02008 142 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 SP1P08047 785 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 LYL1P12980 280 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 HOXB1P14653 301 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-205ENST00000438362 PMCHP20382 165 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 CD1BP29016 333 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 ZNF83P51522 516 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 CASP6P55212 293 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 TMEM183BQ1AE95 376 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 PRR27Q6MZM9 219 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 INO80CQ6PI98 192 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-205ENST00000438362 KLHDC1Q8N7A1 406 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 TCTEX1D1Q8N7M0 179 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 OR52L2PQ8NGH6 319 aa5.72□□□□□ -1.49
CSDE1-205ENST00000438362 REPIN1Q9BWE0 567 aaKnown RBP5.72□□□□□ -1.49
CSDE1-205ENST00000438362 FANCMQ8IYD8 2048 aa5.71□□□□□ -1.49
CSDE1-205ENST00000438362 C3orf80F5H4A9 247 aa5.71□□□□□ -1.49
CSDE1-205ENST00000438362 TMPRSS7Q7RTY8 843 aa5.71□□□□□ -1.49
CSDE1-205ENST00000438362 TPRX1Q8N7U7 411 aa5.71□□□□□ -1.49
CSDE1-205ENST00000438362 OR1P1Q8NH06 330 aa5.71□□□□□ -1.49
CSDE1-205ENST00000438362 OR1L1Q8NH94 360 aa5.71□□□□□ -1.49
CSDE1-205ENST00000438362 ADTRPQ96IZ2 230 aa5.71□□□□□ -1.49
CSDE1-205ENST00000438362 LINC00470Q9BZP3 86 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms