RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 A1L4Q6 167 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 CSF2RBP32927 897 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 RAG2P55895 527 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 TCF24Q7RTU0 167 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 CXCL16Q9H2A7 254 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 ITLN2Q8WWU7 325 aaPredicted RBP9.75□□□□□ -0.85
SCN4A-201ENST00000435607 H3BRM9 83 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 C12orf73Q69YU5 71 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 PRSS41Q7RTY9 318 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 NEU4Q8WWR8 484 aaPredicted RBP9.75□□□□□ -0.85
SCN4A-201ENST00000435607 LRRC3BQ96PB8 259 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 CLEC7AQ9BXN2 247 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 CDS2O95674 445 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 CD74P04233 296 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 BEND2Q8NDZ0 799 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 A0A1B0GUL6 1792 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 PGPA6NDG6 321 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 TDGF1P13385 188 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 PSG6Q00889 435 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 FAM131CQ96AQ9 280 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 HIST1H4GQ99525 98 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 MPV17P39210 176 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 RPL34P49207 117 aaKnown RBP9.74□□□□□ -0.85
SCN4A-201ENST00000435607 FAM74A4Q5TZK3 123 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 LILRA6Q6PI73 481 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 SCN9AQ15858 1988 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 CCL28Q9NRJ3 127 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 IDI2-AS1Q9NZ38 188 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 AKAP6Q13023 2319 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 CELA2BP08218 269 aaPredicted RBP9.74□□□□□ -0.85
SCN4A-201ENST00000435607 C17orf47Q8NEP4 570 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 C11orf68Q9H3H3 251 aaKnown RBP9.74□□□□□ -0.85
SCN4A-201ENST00000435607 ZNF107Q9UII5 783 aaPredicted RBP9.74□□□□□ -0.85
SCN4A-201ENST00000435607 CRPP02741 224 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 ISG15P05161 165 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 EGR1P18146 543 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 ARF6P62330 175 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 TTC32Q5I0X7 151 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 GCSAMLQ5JQS6 135 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 ADAD2Q8NCV1 583 aaKnown RBP9.74□□□□□ -0.85
SCN4A-201ENST00000435607 NRIP2Q9BQI9 281 aa9.74□□□□□ -0.85
SCN4A-201ENST00000435607 PATE3B3GLJ2 98 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 LNP1A1A4G5 178 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 NPIPB11E5RHQ5 1161 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 IER3P46695 156 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 COX14Q96I36 57 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 DUX3Q96PT4 197 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 DOCK1Q14185 1865 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 IGHV1-69-2A0A0G2JMI3 117 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 PSMB11A5LHX3 300 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 MPZL1O95297 269 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 SEZ6L2Q6UXD5 910 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 KIR3DL3Q8N743 410 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 ITLN1Q8WWA0 313 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 ZNF430Q9H8G1 570 aaPredicted RBP9.73□□□□□ -0.85
SCN4A-201ENST00000435607 NXT2Q9NPJ8 142 aaKnown RBP9.73□□□□□ -0.85
SCN4A-201ENST00000435607 TRGV3P03979 118 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 RSPO4Q2I0M5 234 aaPredicted RBP9.73□□□□□ -0.85
SCN4A-201ENST00000435607 LSM10Q969L4 123 aaKnown RBP9.73□□□□□ -0.85
SCN4A-201ENST00000435607 RPS4XP62701 263 aaKnown RBP9.73□□□□□ -0.85
SCN4A-201ENST00000435607 PRSS27Q9BQR3 290 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 CHST5Q9GZS9 411 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 SIRT7Q9NRC8 400 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 METRNQ9UJH8 293 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 IGLV3-16A0A075B6K0 115 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 GDF9O60383 454 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 PAGE4O60829 102 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 LINC00869P0C866 280 aa9.73□□□□□ -0.85
SCN4A-201ENST00000435607 FGF9P31371 208 aaPredicted RBP9.73□□□□□ -0.85
SCN4A-201ENST00000435607 PTP4A3O75365 173 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 APOBEC3AP31941 199 aaPredicted RBP9.72□□□□□ -0.85
SCN4A-201ENST00000435607 MFAP2P55001 183 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 AANATQ16613 207 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 MEGF10Q96KG7 1140 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 NPFFR1Q9GZQ6 430 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 TRGV2A0A075B6R0 118 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 ZP3P21754 424 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 OR10J1P30954 320 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 EMP1P54849 157 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 ZNF645Q8N7E2 425 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 PHLDA1Q8WV24 401 aaPredicted RBP9.72□□□□□ -0.85
SCN4A-201ENST00000435607 DNLZQ5SXM8 178 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 SCN2AQ99250 2005 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 MTCL1Q9Y4B5 1905 aaKnown RBP9.72□□□□□ -0.85
SCN4A-201ENST00000435607 RGPD4Q7Z3J3 1758 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 TMEM250H0YL14 139 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 CEACAM21Q3KPI0 293 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 LINC01555Q8NAE3 123 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 SOSTQ9BQB4 213 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 FAM60AQ9NP50 221 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 IGHV3-72A0A0B4J1Y9 119 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 CRHP06850 196 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 NAT2P11245 290 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 FABP2P12104 132 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 HOXA6P31267 233 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 FAM24BQ8N5W8 94 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 HCP5Q6MZN7 132 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 ABHD12Q8N2K0 398 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 OR9G1Q8NH87 305 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 TXNDC17Q9BRA2 123 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms