RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 ZNF818PQ6ZRF7 136 aa9.27□□□□□ -0.93
LINC00539-203ENST00000434601 LDLRAD3Q86YD5 345 aa9.27□□□□□ -0.93
LINC00539-203ENST00000434601 SGPP2Q8IWX5 399 aa9.27□□□□□ -0.93
LINC00539-203ENST00000434601 EDARADDQ8WWZ3 215 aa9.27□□□□□ -0.93
LINC00539-203ENST00000434601 YPEL2Q96QA6 119 aa9.27□□□□□ -0.93
LINC00539-203ENST00000434601 NEURL2Q9BR09 285 aa9.27□□□□□ -0.93
LINC00539-203ENST00000434601 PIMREGQ9BSJ6 248 aa9.27□□□□□ -0.93
LINC00539-203ENST00000434601 BPESC1Q9GZL8 116 aa9.27□□□□□ -0.93
LINC00539-203ENST00000434601 NAA60Q9H7X0 242 aa9.27□□□□□ -0.93
LINC00539-203ENST00000434601 CCL28Q9NRJ3 127 aa9.27□□□□□ -0.93
LINC00539-203ENST00000434601 GFOD1Q9NXC2 390 aa9.27□□□□□ -0.93
LINC00539-203ENST00000434601 KCNS2Q9ULS6 477 aa9.27□□□□□ -0.93
LINC00539-203ENST00000434601 RBM7Q9Y580 266 aaKnown RBP9.27□□□□□ -0.93
LINC00539-203ENST00000434601 CUBNO60494 3623 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 KIAA2026Q5HYC2 2103 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 IGHV4-30-2A0A087WSY4 118 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 NDUFS8O00217 210 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 RGS11O94810 467 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 SFT2D2O95562 160 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 DUS4LO95620 317 aaKnown RBP9.26□□□□□ -0.93
LINC00539-203ENST00000434601 IGHV2-5P01817 119 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 OR8U9P0C7N5 309 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 SULT1A3P0DMM9 295 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 SULT1A4P0DMN0 295 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 CD34P28906 385 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 GNRHRP30968 328 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 SUPT4H1P63272 117 aaKnown RBP9.26□□□□□ -0.93
LINC00539-203ENST00000434601 MORN2Q502X0 79 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 FAM53AQ6NSI3 398 aaPredicted RBP9.26□□□□□ -0.93
LINC00539-203ENST00000434601 C11orf88Q6PI97 169 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 CMTM1Q8IZ96 169 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 C12orf45Q8N5I9 185 aaPredicted RBP9.26□□□□□ -0.93
LINC00539-203ENST00000434601 BVESQ8NE79 360 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 OR10A7Q8NGE5 316 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 OR52M1Q8NGK5 317 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 OR8U1Q8NH10 309 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 C8orf46Q8TAG6 207 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 CASTOR1Q8WTX7 329 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 RTN4IP1Q8WWV3 396 aaPredicted RBP9.26□□□□□ -0.93
LINC00539-203ENST00000434601 FAM168AQ92567 244 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 PHB2Q99623 299 aa9.26□□□□□ -0.93
LINC00539-203ENST00000434601 SSBP3Q9BWW4 388 aaPredicted RBP9.26□□□□□ -0.93
LINC00539-203ENST00000434601 TEX13DA0A0J9YY54 714 aaPredicted RBP9.25□□□□□ -0.93
LINC00539-203ENST00000434601 A0A1W2PPH5 198 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 ITGB1BP1O14713 200 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 ST8SIA5O15466 376 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 PHF1O43189 567 aaPredicted RBP9.25□□□□□ -0.93
LINC00539-203ENST00000434601 CCNKO75909 580 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 ANXA3P12429 323 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 S100GP29377 79 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 DLX6P56179 175 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 SLC9A3R2Q15599 337 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 MSMO1Q15800 293 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 ESCO2Q56NI9 601 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 LY6G6FQ5SQ64 297 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 CYB5R2Q6BCY4 276 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 HEPN1Q6WQI6 88 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 ZNF645Q8N7E2 425 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 OR2AK2Q8NG84 335 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 OR11H7Q8NGC8 314 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 COQ8AQ8NI60 647 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 C10orf105Q8TEF2 133 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 MITD1Q8WV92 249 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 RAB39BQ96DA2 213 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 GALNT14Q96FL9 552 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 AKR1E2Q96JD6 320 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 OR2D2Q9H210 308 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 MGAT4CQ9UBM8 478 aa9.25□□□□□ -0.93
LINC00539-203ENST00000434601 RPUSD1Q9UJJ7 312 aaKnown RBP9.25□□□□□ -0.93
LINC00539-203ENST00000434601 A0A096LNT2 108 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 A0A0B4J2A0 478 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 C22orf46C9J442 243 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 MPPED1O15442 326 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 MMP23AO75900 390 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 SLC22A5O76082 557 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 IGLV2-14P01704 120 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 OR5AC1P0C628 307 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 NFYBP25208 207 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 RAB7AP51149 207 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 CD83Q01151 205 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 C11orf91Q3C1V1 193 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 Q3ZCU0 254 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 TBC1D26Q86UD7 250 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 DRAM1Q8N682 238 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 UXS1Q8NBZ7 420 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 ZBTB34Q8NCN2 500 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 LY6G5BQ8NDX9 201 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 CLDND2Q8NHS1 167 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 PPP1R14BQ96C90 147 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 ST6GAL2Q96JF0 529 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 ABHD14AQ9BUJ0 271 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 SHPKQ9UHJ6 478 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 PSG11Q9UQ72 335 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 KCNIP3Q9Y2W7 256 aa9.24□□□□□ -0.93
LINC00539-203ENST00000434601 LOC105371242A0A075B767 164 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 PPIAL4CA0A0B4J2A2 164 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 C17orf98A8MV24 154 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 A8MXK9 166 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 VWC2LB2RUY7 222 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 GOSR2O14653 212 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms