RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ECM29Q5VYK3 1845 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 A0A096LPI6 279 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 IGLV1-36A0A0B4J1U3 117 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 RBFOX3A6NFN3 312 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 EEF1E1-BLOC1S5C9J1V9 151 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 EEF1E1O43324 174 aaKnown RBP1.83□□□□□ -2.12
CLK1-204ENST00000432425 HCRTR1O43613 425 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 TPST1O60507 370 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 RDH16O75452 317 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 GCM2O75603 506 aaPredicted RBP1.83□□□□□ -2.12
CLK1-204ENST00000432425 YIF1AO95070 293 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 HPRT1P00492 218 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 MOSP00540 346 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 C8GP07360 202 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 MPC1LP0DKB6 136 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 CD79AP11912 226 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 RPL7P18124 248 aaKnown RBP1.83□□□□□ -2.12
CLK1-204ENST00000432425 KDELR1P24390 212 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 RAB5BP61020 215 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 HSPE1P61604 102 aaKnown RBP1.83□□□□□ -2.12
CLK1-204ENST00000432425 RAP1AP62834 184 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 CACNG7P62955 275 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 HIST1H3AP68431 136 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 H3F3AP84243 136 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 PRDX1Q06830 199 aaKnown RBP1.83□□□□□ -2.12
CLK1-204ENST00000432425 ZNF763Q0D2J5 394 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 PLCXD2Q0VAA5 305 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 BIKQ13323 160 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 OR7A5Q15622 319 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 CCSMST1Q4G0I0 132 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 OCIAD2Q56VL3 154 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 KLF17Q5JT82 389 aaPredicted RBP1.83□□□□□ -2.12
CLK1-204ENST00000432425 NCMAPQ5T1S8 102 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 TEX36Q5VZQ5 186 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 LAMTOR1Q6IAA8 161 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 HIST2H3AQ71DI3 136 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 FAM24BQ8N5W8 94 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 COX18Q8N8Q8 333 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 OR52E2Q8NGJ4 325 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 OR1N2Q8NGR9 330 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 OR13C4Q8NGS5 318 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 OR51Q1Q8NH59 317 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 ZNRF2Q8NHG8 242 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 GPR119Q8TDV5 335 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 SFT2D1Q8WV19 159 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 DCAKDQ8WVC6 231 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 TCTEX1D2Q8WW35 142 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 RXFP2Q8WXD0 754 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 DEDD2Q8WXF8 326 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 TM4SF18Q96CE8 201 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 DCUN1D1Q96GG9 259 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 SEC22AQ96IW7 307 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 CAPZA3Q96KX2 299 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 FAM19A4Q96LR4 140 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 PPP3R2Q96LZ3 170 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 BIRC8Q96P09 236 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 SPACA5Q96QH8 159 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 OR52E6Q96RD3 313 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 HIST1H4GQ99525 98 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 GPR21Q99679 349 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 FAAP24Q9BTP7 215 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 SUCNR1Q9BXA5 334 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 EBPLQ9BY08 206 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 LPAR5Q9H1C0 372 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 OR51E2Q9H255 320 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 CDC42EP4Q9H3Q1 356 aaKnown RBP1.83□□□□□ -2.12
CLK1-204ENST00000432425 RBM22Q9NW64 420 aaKnown RBP eCLIP1.83□□□□□ -2.122e-10■■■■■ 39.5
CLK1-204ENST00000432425 VAX2Q9UIW0 290 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 PRNDQ9UKY0 176 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 PYCARDQ9ULZ3 195 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 TNFSF18Q9UNG2 199 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 DNMT1P26358 1616 aaKnown RBP1.83□□□□□ -2.12
CLK1-204ENST00000432425 TRIP11Q15643 1979 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 ATG2BQ96BY7 2078 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 A0A0G2JN53 185 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 C20orf202A1L168 122 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 GMNCA6NCL1 334 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 ARL5CA6NH57 179 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 C11orf94C9JXX5 98 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 C8orf87E5RJ46 101 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 KRTAP4-16G5E9R7 235 aaPredicted RBP1.83□□□□□ -2.12
CLK1-204ENST00000432425 J3QT63 122 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 TNFSF13O75888 250 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 TNFSF15O95150 251 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 C6orf47O95873 294 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 IGKV1-17P01599 117 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 TTRP02766 147 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 CSN2P05814 226 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 EIF4EP06730 217 aaKnown RBP1.83□□□□□ -2.12
CLK1-204ENST00000432425 IL3P08700 152 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 ZNF30P17039 623 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 TCN2P20062 427 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 RPS3P23396 243 aaKnown RBP eCLIP1.83□□□□□ -2.12
CLK1-204ENST00000432425 PRTN3P24158 256 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 GGT2P36268 569 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 HSPA9P38646 679 aaKnown RBP1.83□□□□□ -2.12
CLK1-204ENST00000432425 KLK7P49862 253 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 TDGF1P3P51864 188 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 EMP1P54849 157 aa1.83□□□□□ -2.12
CLK1-204ENST00000432425 PIGPP57054 158 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms