RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SH2D2AQ9NP31 389 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 A0A1W2PPE3 182 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 CHRNA7P36544 502 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 TCL1AP56279 114 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 HLA-DRB3P79483 266 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 ASB13Q8WXK3 278 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 ASCC3Q8N3C0 2202 aaKnown RBP11.03□□□□□ -0.64
PTCH1-207ENST00000429896 K7EM74 188 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 TAAR5O14804 337 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 GALR1P47211 349 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 ZNF429Q86V71 674 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 ZNF561Q8N587 486 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 ARL6IP6Q8N6S5 226 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 NOL4LQ96MY1 436 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-207ENST00000429896 CIB3Q96Q77 187 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-207ENST00000429896 MRPL37Q9BZE1 423 aaKnown RBP11.03□□□□□ -0.64
PTCH1-207ENST00000429896 IQCF6A8MYZ5 107 aa11.02□□□□□ -0.64
PTCH1-207ENST00000429896 IGKV3-15P01624 115 aa11.02□□□□□ -0.64
PTCH1-207ENST00000429896 REG1BP48304 166 aa11.02□□□□□ -0.64
PTCH1-207ENST00000429896 RAG2P55895 527 aa11.02□□□□□ -0.64
PTCH1-207ENST00000429896 PSG7Q13046 419 aa11.02□□□□□ -0.64
PTCH1-207ENST00000429896 NHLRC2Q8NBF2 726 aa11.02□□□□□ -0.64
PTCH1-207ENST00000429896 DYRK2Q92630 601 aa11.02□□□□□ -0.64
PTCH1-207ENST00000429896 WDR13Q9H1Z4 485 aa11.02□□□□□ -0.64
PTCH1-207ENST00000429896 FPR2P25090 351 aa11.02□□□□□ -0.64
PTCH1-207ENST00000429896 CNOT1A5YKK6 2376 aaKnown RBP11.02□□□□□ -0.65
PTCH1-207ENST00000429896 IGHV3OR16-12A0A075B7B8 117 aa11.02□□□□□ -0.65
PTCH1-207ENST00000429896 PHOX2AO14813 284 aa11.02□□□□□ -0.65
PTCH1-207ENST00000429896 ECSCRQ19T08 205 aa11.02□□□□□ -0.65
PTCH1-207ENST00000429896 CCDC144NLQ6NUI1 221 aa11.02□□□□□ -0.65
PTCH1-207ENST00000429896 C20orf204Q6ZNR8 217 aa11.02□□□□□ -0.65
PTCH1-207ENST00000429896 PGLYRP3Q96LB9 341 aa11.02□□□□□ -0.65
PTCH1-207ENST00000429896 SLC25A15Q9Y619 301 aa11.02□□□□□ -0.65
PTCH1-207ENST00000429896 PPIAL4CA0A0B4J2A2 164 aa11.02□□□□□ -0.65
PTCH1-207ENST00000429896 PPIAL4GP0DN37 164 aa11.02□□□□□ -0.65
PTCH1-207ENST00000429896 AP5S1Q9NUS5 200 aa11.02□□□□□ -0.65
PTCH1-207ENST00000429896 MUC22E2RYF6 1773 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-207ENST00000429896 FAM24AA6NFZ4 105 aa11.02□□□□□ -0.65
PTCH1-207ENST00000429896 HAX1O00165 279 aa11.02□□□□□ -0.65
PTCH1-207ENST00000429896 MBP02144 154 aa11.02□□□□□ -0.65
PTCH1-207ENST00000429896 FOXG1P55316 489 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-207ENST00000429896 GCSAMQ8N6F7 178 aa11.02□□□□□ -0.65
PTCH1-207ENST00000429896 ZNF79Q15937 498 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 SEZ6L2Q6UXD5 910 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 ST6GAL2Q96JF0 529 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 DENND4AQ7Z401 1863 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 TRBV5-7A0A0A0MS05 114 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 MUC1P15941 1255 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-207ENST00000429896 TMEM56Q96MV1 263 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 NAT8BQ9UHF3 227 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 FAM90A10PA6NDY2 464 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 FAM90A18PA6NE21 464 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 FAM90A16PA6NEW6 464 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 FAM90A20PA6NIJ5 464 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 FAM90A8PA6NJQ4 464 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 FAM90A7PA6NKC0 464 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 FAM90A22PA8MWA6 464 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 FAM90A12PA8MX19 464 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 FAM90A5PA8MXJ8 464 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 FAM90A23PA8MXZ1 464 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 FAM90A15PP0C7V4 464 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 FAM90A13PP0C7W8 464 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 FAM90A14PP0C7W9 464 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 FAM90A24PP0C7X0 464 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 PTX4Q96A99 478 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 GSX2Q9BZM3 304 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 MTFP1Q9UDX5 166 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 CACNG5Q9UF02 275 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 THBDP07204 575 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 HNRNPA3P51991 378 aaKnown RBP11.01□□□□□ -0.65
PTCH1-207ENST00000429896 TMEM97Q5BJF2 176 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 ZNF474Q6S9Z5 364 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-207ENST00000429896 TMEM204Q9BSN7 226 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 PRO1933Q9H354 126 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 ANXA10Q9UJ72 324 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 HIST1H3AP68431 136 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 SLC38A11Q08AI6 406 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 C1RLQ9NZP8 487 aa11.01□□□□□ -0.65
PTCH1-207ENST00000429896 RALYQ9UKM9 306 aaKnown RBP11.01□□□□□ -0.65
PTCH1-207ENST00000429896 TMSB15BA0A087X1C1 80 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 RHBDL1O75783 438 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 HTR1DP28221 377 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 UBE2V2Q15819 145 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 GLDNQ6ZMI3 551 aaPredicted RBP11□□□□□ -0.65
PTCH1-207ENST00000429896 REPIN1Q9BWE0 567 aaKnown RBP11□□□□□ -0.65
PTCH1-207ENST00000429896 RABAC1Q9UI14 185 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 C3orf85A0A1B0GTC6 90 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 CTDSPLO15194 276 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 GSTZ1O43708 216 aaPredicted RBP11□□□□□ -0.65
PTCH1-207ENST00000429896 PSMB2P49721 201 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 GNG4P50150 75 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 IL24Q13007 206 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 TOMM20LQ6UXN7 152 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 TPRX1Q8N7U7 411 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 PRSS3P2Q8NHM4 247 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 RASL11BQ9BPW5 248 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 INSIG2Q9Y5U4 225 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 OR5AC1P0C628 307 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 PLAURQ03405 335 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 ETFRF1Q6IPR1 90 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms