RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 SSSCA1O60232 199 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 ID3Q02535 119 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 GAB4Q2WGN9 574 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 CPEB2Q7Z5Q1 589 aaKnown RBP7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 OR8B3Q8NGG8 313 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 OR8B2Q96RD0 313 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 FNDC4Q9H6D8 234 aaPredicted RBP7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 VSIRQ9H7M9 311 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 PSG8Q9UQ74 426 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 ATG2AQ2TAZ0 1938 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 SPAARA0A1B0GVQ0 90 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 FEZF1A0PJY2 475 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 LIPT2A6NK58 231 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 FOXI3A8MTJ6 420 aaPredicted RBP7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 ZNF878C9JN71 531 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 DEGS1O15121 323 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 ZNF20P17024 532 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 CEBPBP17676 345 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 CRYBB3P26998 211 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 FUT6P51993 359 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 MLF1P58340 268 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 PSG4Q00888 419 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 GLIPR1L1Q6UWM5 242 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 ZNF547Q8IVP9 402 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 SFTPA1Q8IWL2 248 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 OR4N5Q8IXE1 308 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 OR5D14Q8NGL3 314 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 SPSB4Q96A44 273 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 AICDAQ9GZX7 198 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 GP6Q9HCN6 339 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 FAM206AQ9NX38 181 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 C1RLQ9NZP8 487 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 TAC3Q9UHF0 121 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 TSSC4Q9Y5U2 329 aaPredicted RBP7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 C2orf16Q68DN1 1984 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 TEX48A0A1B0GUV7 120 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 LINC01553A4QN01 128 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 OTOL1A6NHN0 477 aaPredicted RBP7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 K7EQS6 105 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 LATO43561 262 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 HNRNPA2B1P22626 353 aaKnown RBP7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 PMP22Q01453 160 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 ZNF141Q15928 474 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 CEACAM21Q3KPI0 293 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 TMEM164Q5U3C3 297 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 LCN12Q6JVE5 192 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 FA2HQ7L5A8 372 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 BLNKQ8WV28 456 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 OR10A2Q9H208 303 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 IL23AQ9NPF7 189 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 DNAJB12Q9NXW2 375 aaKnown RBP7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 KCNIP1Q9NZI2 227 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 TRAPPC2LQ9UL33 140 aa7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 BOKQ9UMX3 212 aaPredicted RBP7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.56□□□□□ -1.2
CDC42BPA-206ENST00000429440 MDFIC2A0A1B0GVS7 189 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 A0A1B0GW15 77 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 METTL12A8MUP2 240 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 TMEM50AO95807 157 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 PGCP20142 388 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 ZNF90Q03938 601 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 ZIC1Q15915 447 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 KIAA1644Q3SXP7 199 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 LRRC25Q8N386 305 aaPredicted RBP7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 ZNF418Q8TF45 676 aaPredicted RBP7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 TSKUQ8WUA8 353 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 C6orf106Q9H6K1 298 aaPredicted RBP7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 IL36BQ9NZH7 164 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 SS18L2Q9UHA2 77 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 EMC9Q9Y3B6 208 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 KIAA1324LA8MWY0 1029 aaPredicted RBP7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 LMX1BO60663 402 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 ADH5P11766 374 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 GATA2P23769 480 aaPredicted RBP7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 OR1D5P58170 312 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 CDRT4Q8N9R6 151 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 TSTD1Q8NFU3 115 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 OR52N5Q8NH56 324 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 GPER1Q99527 375 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 NRTNQ99748 197 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 HINT2Q9BX68 163 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 IL36GQ9NZH8 169 aa7.55□□□□□ -1.2
CDC42BPA-206ENST00000429440 SNURFLB1AK76 121 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 NPY1RP25929 384 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 IL12BP29460 328 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 ARL3P36405 182 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 GNG4P50150 75 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 LGALS4P56470 323 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 UBE2G1P62253 170 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 RPL24P83731 157 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 GAGE5Q13069 117 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 GAGE6Q13070 117 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 COL9A2Q14055 689 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 TESK1Q15569 626 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 VSTM2AQ8TAG5 236 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 C18orf32Q8TCD1 76 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 RAX2Q96IS3 184 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 RCHY1Q96PM5 261 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 FBRSQ9HAH7 460 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms