RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 SIGLEC5O15389 551 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 GAPDHP04406 335 aaKnown RBP8.65□□□□□ -1.02
HDAC9-210ENST00000428307 IRF2P14316 349 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 TLE1Q04724 770 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 EIF5AL1Q6IS14 154 aaKnown RBP8.65□□□□□ -1.02
HDAC9-210ENST00000428307 TMEM252Q8N6L7 170 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 FAM216BQ8N7L0 139 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 UBAC2Q8NBM4 344 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 HSD17B11Q8NBQ5 300 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 TCTEX1D2Q8WW35 142 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 NARS2Q96I59 477 aaKnown RBP8.65□□□□□ -1.02
HDAC9-210ENST00000428307 HRH4Q9H3N8 390 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 C11orf1Q9H5F2 150 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 PLA2G2EQ9NZK7 142 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 LPAR3Q9UBY5 353 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 DIDO1Q9BTC0 2240 aaKnown RBP8.65□□□□□ -1.02
HDAC9-210ENST00000428307 C17orf98A8MV24 154 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 PITX3O75364 302 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 CLDN1O95832 211 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 ADH4P08319 380 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 GRNP28799 593 aaKnown RBP8.65□□□□□ -1.02
HDAC9-210ENST00000428307 HTD2P86397 168 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 PAX5Q02548 391 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 Q3ZCU0 254 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 UTF1Q5T230 341 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 SPAG16Q8N0X2 631 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 LEAP2Q969E1 77 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 MARC2Q969Z3 335 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 NARFLQ9H6Q4 476 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 NGBQ9NPG2 151 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 LYRM2Q9NU23 88 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-210ENST00000428307 RNF115Q9Y4L5 304 aa8.65□□□□□ -1.02
HDAC9-210ENST00000428307 USF3Q68DE3 2245 aa8.65□□□□□ -1.03
HDAC9-210ENST00000428307 BORCS7-ASMTA0A0B4J1R7 106 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 LINC00473A8K010 186 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 RNF212BA8MTL3 300 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 TMPRSS2O15393 492 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 MED6O75586 246 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 TNFRSF1AP19438 455 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 G6PCP35575 357 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 CA7P43166 264 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 ARHGDIBP52566 201 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 PAX9P55771 341 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 BRWD1-AS2P59051 145 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 MORN2Q502X0 79 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 STUMQ69YW2 141 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 ZNF561Q8N587 486 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 ZBTB34Q8NCN2 500 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 FAM222BQ8WU58 562 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 CCL17Q92583 94 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 LSM10Q969L4 123 aaKnown RBP8.64□□□□□ -1.03
HDAC9-210ENST00000428307 SH3BGRL3Q9H299 93 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 A0A1W2PPE3 182 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 KIAA1324LA8MWY0 1029 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-210ENST00000428307 SHISA9B4DS77 424 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 E7EQL1 145 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 DLL1O00548 723 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 SHOXO15266 292 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 WNT2P09544 360 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 ZP3P21754 424 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 ID4P47928 161 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 ZNF134P52741 427 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 LY6DQ14210 128 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 PXDC1Q5TGL8 231 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 TRAT1Q6PIZ9 186 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 EIF4E3Q8N5X7 224 aaKnown RBP8.64□□□□□ -1.03
HDAC9-210ENST00000428307 OR5C1Q8NGR4 320 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 TOLLIPQ9H0E2 274 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 SAP30LQ9HAJ7 183 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 CALYQ9NYX4 217 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 COQ3Q9NZJ6 369 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 RFNGQ9Y644 331 aa8.64□□□□□ -1.03
HDAC9-210ENST00000428307 VSTM5A8MXK1 200 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 KRBOX1C9JBD0 128 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 PROP1O75360 226 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 S1PR2O95136 353 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 CLDN14O95500 239 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 IAPPP10997 89 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 GPR12P47775 334 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 LOXL3P58215 753 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 CATR1Q13166 79 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 EIF4EBP1Q13541 118 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-210ENST00000428307 CDSNQ15517 529 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 ODF3L1Q8IXM7 274 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 BPIFCQ8NFQ6 507 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 Q8TCH9 128 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 C14orf79Q96F83 325 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 SDSLQ96GA7 329 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 GAFA1Q96PS6 74 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 SLC25A31Q9H0C2 315 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 FAM234AQ9H0X4 552 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 OR6C3Q9NZP0 311 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 PIGBOS1A0A0B4J2F0 54 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-210ENST00000428307 MED19A0JLT2 244 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-210ENST00000428307 LRRC30A6NM36 301 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 AGPAT2O15120 278 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 C1QL1O75973 258 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 PLAUP00749 431 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 SLC25A6P12236 298 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms